Query= MSMg01no292_c14.b1 MSMg01no292_c14.b1 CHROMAT_FILE:
MSMg01no292_c14.b1 PHD_FILE: MSMg01no292_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:09 2005
(317 letters)
>mm_chr3_148491666_148492380
Length = 715
Score = 524 bits (271), Expect = e-153
Identities = 300/313 (95%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 5 gaattctaagatgtactttgcattatgtacctccagtggagaaactgctgagttctagag 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagaagtaatttgcattatgtacctccagtggagaaactgctgagttctagag 264
Query: 65 acctggctgccaagctacttcttgatgttgaccaactaaacacatggaatgagacttgga 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctggctgctaagctacttcttgatgttgaccaactaaacacatggaatgagacttgga 324
Query: 125 tgatccacgcactaaggcgaccgagaggaaccaattacacacagcccacgaaacagttaa 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatccatgcactaaggcgaccgagaggaaccaattacacacagcccacgaaacagttaa 384
Query: 185 cattaatgagaaggtaacgtttttattgtctgcatacttcccacctaatgttaaaaggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattaatgagaaggtaacgtttttattgtctgcatacttcccacctaatgttaaaaggct 444
Query: 245 tttgtcttttcttctcatgtttacactgtctttgaaacttagttgtttccgtttccaaca 304
|||||||||||||||||||||||||||| | | ||||||||||||||||| ||||
Sbjct: 445 tttgtcttttcttctcatgtttacactg-cat-gaaacttagttgtttcc------aaca 496
Query: 305 gagtaagtcctac 317
|||||||||||||
Sbjct: 497 gagtaagtcctac 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 715
Length adjustment: 9
Effective length of query: 308
Effective length of database: 706
Effective search space: 217448
Effective search space used: 217448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_c14.g1 MSMg01no292_c14.g1 CHROMAT_FILE:
MSMg01no292_c14.g1 PHD_FILE: MSMg01no292_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:09 2005
(200 letters)
>mm_chr3_148667220_148667819
Length = 600
Score = 371 bits (192), Expect = e-107
Identities = 198/200 (99%)
Strand = Plus / Minus
Query: 1 ttcattgaggaggtgcaatagagttgggaaggaaggatgtctctgtgggagtggtaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttcattgaggaggtgcaatagagttgggaaggaaggatgtctctgtgggagtggtaatcc 341
Query: 61 tggagtgaaattacttactgttgagaggagaagacagagaaagaccctaggatgtcaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tggagtgaaattacttactgttgagaggagaagacagagaaagaccctaggatgtcaggg 281
Query: 121 ccaggtatggaggaggagtaactggccggctttggattcagcgagttctccctggcctca 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 280 ccaggtatggaggaggagtaactggccggctttggattcagtgagttctccctggcctca 221
Query: 181 ttaggtgttgttctctgtat 200
||||||||||||||| ||||
Sbjct: 220 ttaggtgttgttctcagtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
