Query= MSMg01no292_o18.b1 MSMg01no292_o18.b1 CHROMAT_FILE:
MSMg01no292_o18.b1 PHD_FILE: MSMg01no292_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:08 2005
(184 letters)
>mm_chr3_107525105_107525688
Length = 584
Score = 348 bits (180), Expect = e-100
Identities = 183/184 (99%)
Strand = Plus / Plus
Query: 1 actcaggaagggattataggggggactggagaactgggtcctcaaatcacttacattacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 actcaggaagggattataggggggactggagaactgggtcctcaaatcacttatattacc 260
Query: 61 tgccaagaagataagcttccctcagagagctcagtcaacttaaagactcactaaagtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccaagaagataagcttccctcagagagctcagtcaacttaaagactcactaaagtctt 320
Query: 121 taaaaagaaatgtaattgcctatcacctaacaataaaaataattaaaggcagacttagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaaagaaatgtaattgcctatcacctaacaataaaaataattaaaggcagacttagtt 380
Query: 181 tgat 184
||||
Sbjct: 381 tgat 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_o18.g1 MSMg01no292_o18.g1 CHROMAT_FILE:
MSMg01no292_o18.g1 PHD_FILE: MSMg01no292_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:08 2005
(250 letters)
>mm_chr3_107709972_107710618
Length = 647
Score = 453 bits (234), Expect = e-132
Identities = 245/250 (98%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 1 agcatagttcctatattaaagctagagttacgcttgattgaggtatagtaatattggact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agcatagttcctatattaaagctagagttacgcttgattgaggtatagtaatattggact 388
Query: 61 tggatagcaggtggagaaatgtaaactttctgttctctgggaacagatagaaccctgccc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggatagcaggtggagaaatgtagactttctgttctctgggaacagatagaaccctgccc 328
Query: 121 tgactccctctagcctagatgcttcaacccaggatctgctaagtcattgggtgggatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgactccctctagcctagatgcttcaacccaggatctgctaagtcattgggtgggatctg 268
Query: 181 ggctctttttcatgcatgttctgagaactcctctttttttcttttttcctgcctgctcct 240
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 267 ggctctttttcaagcatgttctgagaactc---tttttttcttttttcctgcctgctcct 211
Query: 241 tcctctatgt 250
||||||||||
Sbjct: 210 tcctctatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 647
Length adjustment: 9
Effective length of query: 241
Effective length of database: 638
Effective search space: 153758
Effective search space used: 153758
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
