ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGTCCAGAAAACAAAAGTCCTCCTGAGTTTCATTCTGGGAATAACTAA
GCACAGAGAAGTAAAAGCCAAAGGAATTTCTGCATAGCTAGATGATGAAA
ATTGTTTCAAGTCCACAATATAACATAAAGCAACAATGGTGCTAATCAGC
GTCTGCTAACTCTTGAGCAATAGTGTCTAAAACTAGAGAACCAGTGCTGT
CCTTACCTGCTGCTGTCCAGGCAAAACAGCTGTCCAAATATCTCTCCAGA
GCTTCTACTGGAGAACATCAACTCTGATGTCATCACAGCCTGAGGATAGG
AACTCTTGGATTCCATGCTCTAAGATACATGTTGGACCACAGAGGGGATC
AATAACATTTTGCCCACCAACTGTATTATGTCACTGTATATTTGATACAG
CACTGAAGATATTTGACTGGGTGTTCATGAAACTCATACAATTAGGAAGT
GTGTATGTATGTGGACAGCTTTAATCATTCTCATGCATACGATCAAGAAA
AAGGCATAGAAAATCAATTCTATGTAAAAAATGAGGGACTTATTTAAAAT
CCAACATATGGATAAAAACGGAGAATATGAAGTGTTTTGCTCTGTCAACA
TCTGTTGCTGCAGTGTTTGATCCTTCATCCTAGTATTAACACTATGATAC
AAATCATGAAAA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATCATG
AATGGGTGTTGGATCTTGTCAAATGCTTTTTCAGTGTCTAAGGAGATGAT
CATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGA
ATTTCCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGG
TCAGAATAGATGTTTGTTTTAATGTGTTCTTGGATCCCGGTAGTGAGAAT
TTTATTGATTATTTTTTCATCGATATTCATAAGGGAAATTGGTCTGAAGT
TCTCTATCTTTTTTGTATCTTCCCGCACCCTCAGGTATCAGAGTAATTGT
GGCTTCACAGAATGACCCCCCCAGAGTACCTTCTACTTCTATTTTGTGGA
ATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAAC
TCTGCACTAAACCCATCTGGTCCTTGGCTTTTTTTTGGCTGGGAGACTAT
TAATGACTGCTTCTATTTCTTTAGGGGATATGGTACTGTTTAGATTGTTA
ACTTGACCCTGATTTATCTTTGTTTCCTGGTACCTGCCTTACAATTTGTC
CTTTCCGTCTCAGTTTTTCAGTTCCCGTGATCATAACCTTTATTATAACC
GTCTGATG

Query= MSMg01no293_e02.b1 MSMg01no293_e02.b1 CHROMAT_FILE:
MSMg01no293_e02.b1 PHD_FILE: MSMg01no293_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:36 2005
         (658 letters)



>mm_chr3_150824214_150825271
          Length = 1058

 Score =  932 bits (482), Expect = 0.0
 Identities = 587/630 (93%), Gaps = 15/630 (2%)
 Strand = Plus / Minus

                                                                        
Query: 30   ctcctgagtttcattctgggaataactaagcacagagaagtaaaagccaaaggaatttct 89
            |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 1058 ctcctgagtttcattctgggaataactaagcacagaaaagtaaaagcaaaaggaatttct 999

                                                                        
Query: 90   gcatagctagatgatgaaaattgtttcaagtccacaatataacataaagcaacaatggtg 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998  gcatagctagatgatgaaaattgtttcaagtccacaatataacataaagcaacaatggtg 939

                                                                        
Query: 150  ctaatcagcgtctgctaactcttgagcaatagtgtctaaaactagagaaccagtgctgtc 209
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 938  ctaatcagcgtcggctaactcttgagcaatagtctctaaaactagagaaccagtgctgtc 879

                                                                        
Query: 210  cttacctgctgctgtccaggcaaaacagctgtccaaatatctctccagagcttctactgg 269
            || |||||||||||||||||             ||||||||||| |||||||||||||||
Sbjct: 878  ctcacctgctgctgtccagg-------------caaatatctcttcagagcttctactgg 832

                                                                        
Query: 270  agaacatcaactctgatgtcatcacagcctgaggataggaactcttggattccatgctct 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  agaacatcaactctgatgtcatcacagcctgaggataggaactcttggattccatgctct 772

                                                                        
Query: 330  aagatacatgttggaccacagaggggatcaataacattttgcccaccaactgtattatgt 389
            |||||||||| |||||||||||||||| ||||||||||||||  | ||||||||||||||
Sbjct: 771  aagatacatgctggaccacagaggggagcaataacattttgcggatcaactgtattatgt 712

                                                                        
Query: 390  cactgtatatttgatacagcactgaagatatttgactgggtgttcatgaaactcatacaa 449
            ||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||| ||
Sbjct: 711  cactgtatatttgatacagcactgaggatatttgactgagtgttcatggtactcataaaa 652

                                                                        
Query: 450  ttaggaagtgtgtatgtatgtggacagctttaatcattctcatgcatacga-tcaagaaa 508
            ||| |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 651  ttaagaagtgtgtatgcatgtggacagctttaatcattctcatgcatac-agtcaagaaa 593

                                                                        
Query: 509  aaggcatagaaaatcaattctatgtaaaaaatgagggacttatttaaaatccaacatatg 568
            |||| ||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||
Sbjct: 592  aaggtatacaaaatcaattctatataaaaaatgaggggcttatttgaaatccaacatatg 533

                                                                        
Query: 569  gataaaaacggagaatatgaagtgttttgctctgtcaacatctgttgctgcagtgtttga 628
            ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 532  gataacaacggagaatatgaagtgttttgttctgtcaacatctgttgctccagtgtttga 473

                                          
Query: 629  tccttcatcctagtattaacactatgatac 658
            ||| |||||||||| |||||||||||||||
Sbjct: 472  tccctcatcctagttttaacactatgatac 443


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)