Query= MSMg01no293_n22.b1 MSMg01no293_n22.b1 CHROMAT_FILE:
MSMg01no293_n22.b1 PHD_FILE: MSMg01no293_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:24 2005
(319 letters)
>mm_chr3_141279094_141279815
Length = 722
Score = 547 bits (283), Expect = e-160
Identities = 307/316 (97%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 7 attcaaggagccagaggaagtcagggaaaaagaataaatgcattctaatttgagatataa 66
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 522 attcaaggagccagaggaagtcagggaaaaagaataaatacattctaatttgagatataa 463
Query: 67 ttaatataggattaccataagaatcaatataattctaattttatgaattccggttggcga 126
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 462 ttaatataggattacaataagaatcaatataattctaattttatgaattccggttggtga 403
Query: 127 cagagtgactactgtgtgcattataggacaccccagggaagg-aaatttctgtggaagtt 185
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 402 cagagtgactactgtgtgcattataggacaccccagggaaggtaaatttctgtggaagtt 343
Query: 186 gaacgtggtaagcaaaatgggtagtttaaaattataatacagtattgatgacatgtagaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaacgtggtaagcaaaatgggtagtttaaaattataatacagtattgatgacatgtagaa 283
Query: 246 aggtgtgtgtattgggggg--ggtaggaatgtgcatttgtatagaagctganacagagcc 303
|||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 282 aggtgtgtgtgttggggggtgggtaggaatgtgcatttgtatagaagctgagacagagcc 223
Query: 304 cttgaaggtatttgga 319
||||||||| ||||||
Sbjct: 222 cttgaaggtgtttgga 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_n22.g1 MSMg01no293_n22.g1 CHROMAT_FILE:
MSMg01no293_n22.g1 PHD_FILE: MSMg01no293_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:24 2005
(336 letters)
>mm_chr3_141176074_141176809
Length = 736
Score = 594 bits (307), Expect = e-174
Identities = 322/327 (98%)
Strand = Plus / Plus
Query: 1 caacatgaaaaatactgaaaggagctatacatctcactgacctgatttatcaacagttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacatgaaaaatactgaaaggagctatacatctcactgacctgatttatcaacagttat 260
Query: 61 taagagacaataaataattcactttccactgtggctgctttcaatggacaaatgatgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagagacaataaataattcactttccactgtggctgctttcaatggacaaatgatgatt 320
Query: 121 ttcttttcatatataagaagaaagaatttttgggggtgcatgtgcgtgtgtgtatgagtg 180
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 321 ttcttttcatatataagaagaaagaattttttgaggtgcatgtgcgtgtgtgtatgagtg 380
Query: 181 tgtgcatgagagagagtattgtgagtgtgtgtatatgtgtgtgtacatgcatgtgtgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgcatgagagagagtattgtgagtgtgtgtatatgtgtgtgtacatgcatgtgtgtac 440
Query: 241 atgtgtgtgtgtgttcgcatgagagagtattgtgtataaatgtttgtgagtgtgtgtatg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgtgtgtgtgtacgcatgagagagtattgtgtataaatgtttgtgagtgtgtgtatg 500
Query: 301 tgcgtgcacatgtgtgtgtgtgtgtgt 327
|| ||| ||||||||||||||||||||
Sbjct: 501 tgtgtgtacatgtgtgtgtgtgtgtgt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
