Query= MSMg01no294_h07.b1 MSMg01no294_h07.b1 CHROMAT_FILE:
MSMg01no294_h07.b1 PHD_FILE: MSMg01no294_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:08 2005
(316 letters)
>mm_chr3_131463931_131464645
Length = 715
Score = 485 bits (251), Expect = e-141
Identities = 299/321 (93%), Gaps = 11/321 (3%)
Strand = Plus / Plus
Query: 5 gaattctccagtatatcaaaagcttcagttttcttttaaacaaatcttttaccagtggag 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaattctccagtaaatcaaaagcttcagttttcttttaaacaaatcttttaccagtggag 254
Query: 65 ctcatcgactcttaccttcatgcccattatgtggtacgtttgtaaagtacaagaagatag 124
||||||| ||||| | ||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 255 ctcatcgcctctttctttcatgcccattatgtggtacgtatgtaaagtacaagcagatag 314
Query: 125 cagaa----------ggaggcaagagaaaccaggtgaatgactgctgcagtcggtgcatc 174
||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 315 cagaaggaaggacggggaggcaaaag-aaccaggtgaatgagtgctgcagtcggtgcatc 373
Query: 175 agaaatccagctcttcagtagtgtgccaagaatatctcatctgtgtctcgataccagctg 234
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agaaacccagctcttctgtagtgtgccaagaatatctcatctgtgtctcgataccagctg 433
Query: 235 ctgtctagtcttatagaagttcttatactttttccttagattcaaccttactcctgagtc 294
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 434 ctgtctagtcttatagaagttcttatactttttccttagattcaaccatactcctgagtc 493
Query: 295 cccagttcttttcttctatca 315
|||||||||||||||||||||
Sbjct: 494 cccagttcttttcttctatca 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_h07.g1 MSMg01no294_h07.g1 CHROMAT_FILE:
MSMg01no294_h07.g1 PHD_FILE: MSMg01no294_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:08 2005
(241 letters)
>mm_chr3_131648037_131648677
Length = 641
Score = 354 bits (183), Expect = e-102
Identities = 201/207 (97%)
Strand = Plus / Minus
Query: 1 cttttttaataattaaaaatgcaaatgtggagggacatgggatgataacgcattgattaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 377 cttttttaataattaaaaatgcaaatgtggagggacatgggatgataaggcattgattaa 318
Query: 61 cctcactttctccctccatgtaaaacttactagccttcaactcccaacgttctggaccca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 317 cctcactttctccctccatgtaaaacttactagccttcaactcccaatgttctggaccca 258
Query: 121 cgaaaatccataaagattgagtacattcagagtttttcccacattcattcatttatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cgaaaatccataaagattgagtacattcagagtttttcccacattcattcatttatttgt 198
Query: 181 gtgtgtgtgagagtgtgtctgtatgtg 207
||||||||| | |||||| ||| ||||
Sbjct: 197 gtgtgtgtgtgtgtgtgtgtgtgtgtg 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
