Query= MSMg01no296_o17.b1 MSMg01no296_o17.b1 CHROMAT_FILE:
MSMg01no296_o17.b1 PHD_FILE: MSMg01no296_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:14 2005
(618 letters)
>mm_chr3_147607267_147608284
Length = 1018
Score = 1071 bits (554), Expect = 0.0
Identities = 602/618 (97%)
Strand = Plus / Minus
Query: 1 aattctaaacaagctttaaaacaacctaagaaacaaacagaaacatacttcatgagggaa 60
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 818 aattctaaacaagctttaaaacaagctaagaaacaaacagaaacatacctcatgagggaa 759
Query: 61 tgtccttaggagtgaacgacacagttcctagagcagctctgagttagttcttaaaacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tgtccttaggagtgaacgacacagttcctagagcagctctgagttagttcttaaaacagt 699
Query: 121 cttggctttaaaggttgagtctggccattctccagctccgtcacctacctgtctggtaat 180
|||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 698 cttggctttaaaggttaagtctggccattctccagctctgtcaccttcctgtctggtaat 639
Query: 181 gtgacttcttttgtaagtgctcgcgtcattgtgctattacttgccagaacactctcagca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtgacttcttttgtaagtgctcgagtcattgtgctattacttgccagaacactctcagca 579
Query: 241 gactatattgtcatgcatttgaacccacaagtgggctatactaactctttttatacatac 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 578 gactatattgtcatgcatttgaacccacaagtgggctatattaactctttttagacatac 519
Query: 301 ctggccttgggtattttgttttagtcatgggaaattaagaaacacacggaactggtatca 360
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 518 ctggccttgggtattttgttttagtcatgggaaattaagaaatagagggaactggtatca 459
Query: 361 agaagtggagtcattgtcataactattcctgaccttcttggaactgtgtctggagagggg 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 458 agaagtggagtcattgtcataactattcctgaccatcttggaactgtgtctggagagggg 399
Query: 421 aagtctaacaaagcctagaatggtgttcactgtgagttataggagaatttgatgacaagg 480
|||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aagtctaaaaaagcctcgaacggtgttcactgtgagttataggagaatttgatgacaagg 339
Query: 481 agacaggaaacaagtctcggctggaaatgatgtgattgtgtatgggagaaaactctgtcc 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agacaggaaacaagtctcggatggaaatgatgtgattgtgtatgggagaaaactctgtcc 279
Query: 541 ttttacacaattgcaaagaaccgggatgttctatgcccatgacctcagattttatggaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttttacacaattgcaaagaaccgggatgttctatgcccatgacctcagattttatggaag 219
Query: 601 attgaacttgaaagtgat 618
||||||||||||||||||
Sbjct: 218 attgaacttgaaagtgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_o17.g1 MSMg01no296_o17.g1 CHROMAT_FILE:
MSMg01no296_o17.g1 PHD_FILE: MSMg01no296_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:14 2005
(265 letters)
>mm_chr3_147607623_147608287
Length = 665
Score = 439 bits (227), Expect = e-128
Identities = 254/263 (96%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 aattctaaacaagctttaaaacaacctaagaaacaaacagaaacatacttcatgagggaa 60
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 462 aattctaaacaagctttaaaacaagctaagaaacaaacagaaacatacctcatgagggaa 403
Query: 61 tgtccttaggagtgaacgacacagttcctagagcagctctgagttagttcttaaaacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgtccttaggagtgaacgacacagttcctagagcagctctgagttagttcttaaaacagt 343
Query: 121 cttggctttataggttgagtctggccattctccagctccgtcacctacctgtctggtaat 180
|||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 342 cttggctttaaaggttaagtctggccattctccagctctgtcaccttcctgtctggtaat 283
Query: 181 gtgacttcttttgtaagtgctcgcgtcattgtgctattacttgccagaacactctcagca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 282 gtgacttcttttgtaagtgctcgagtcattgtgctattacttgccagaacactctcagca 223
Query: 241 gact-tgattgtcatgcatttga 262
|||| | ||||||||||||||||
Sbjct: 222 gactat-attgtcatgcatttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
