TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCANAAATCCGCGG
AATTCTTATCTAATATCCAAGTTCTTTTAAGGAACTGAATGCCGTAGTGC
TTGGTATTATGTTTTTATATGCCATTGCCAGCTACTCTTTTCTTTAATTG
TAAATTGGATAAAAACAGAATATTCAGAAGGTTATCCTATCTTCTCAAAA
AATAAACATGTTTCTGTCAAATATATTTTTAATTTTTCTACCAAACTTAG
TCTTTCATGATTTATCACAAGCATATGAGACTATAACAGACTTTTCTTTT
CTTCCTACCAATATAAATATGTGTTCCTTCTGTACATATATACCCATGTT
TGTGTATGTGCATGGACTCATTGCACATATACACAAACACATATAAACAC
TCATACACACTCAATAAAAAGAGCATTTAAAGAGAAATGATCAAACAGGG
TCAATACTAATTTAAAATAGAAAAGATTTTGTTCAAACTGTAGTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTG
TTCTCTCTCTCTCTGTCTTGCTCTCTCTCTCTCTCCCCCTATCTCTTCCC
TCCTCAAATCTACATTTACTATACATATTTACCTACTGTTAATAATCATG
TTTGTGTGTGTACATTTTTTAAGATGTGTCTATGATATGCTGTCATTCAT
ATATGGCATGCAGCTAACAACATAAAATACAGG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTTAAAGAAATGCAGGAACCCAC
AGACTAATATGTAGAAGACAAAATAAATCCCTTAAAGAAATATAGTAGAA
TACAATCAAGCAGATGAAGGGATTTAACAAAATGGTTTAAGAATTTAAAA
AATGTAAATAGATACAACAACAACAACAACAACAACAACAAAGCCACACA
AAGTGATATGGACCCTGGATATGGACAACTTAGAAAAGAGCTATAGTAGC
AAACATCATCAACAGAATAAATGGATAAATGATAGAATCTCAGGTAGAGA
AAATATCTTAGAAGATATTGAGGCATTGGTCAAAGAAAATGCAAAGTGTC
ATAGGCTCCTAACCCAAAATATTCACGAAATTCGAGTGGATGGATTTAGG
CAAAATATACAGAATTCCTAGAATGGCACTTACAGATCTTAAGAAGTATA
GCAAGCAGAAAGGCCTAAGTGATGATGGTTCAATTCCAATTAGAAGGGGG
AAGGAAATAATCATGGTAGTCAGAGGGAGGGAGACACCTGGATGTGAGAA
GGGAGATTGAGGTAATAAGCAGAACAGGATCAGATTATGGGGTAAGGGGA
CAGGAGAGAAGCCCAGAATGTCTAGATAATGAATAGAAATAAGCAGATGG
GAAAACTCTAGAGTATCACAGACCCAGGAGATGAGAG

Query= MSMg01no297_d07.b1 MSMg01no297_d07.b1 CHROMAT_FILE:
MSMg01no297_d07.b1 PHD_FILE: MSMg01no297_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:35 2005
         (649 letters)



>mm_chr3_43217983_43219031
          Length = 1049

 Score = 1141 bits (590), Expect = 0.0
 Identities = 637/674 (94%), Gaps = 34/674 (5%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcttatctaatatccaagttcttttaaggaactgaatgccgtagtgcttggtatta 63
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaatccttatctaatatccaagttcttttaaggaactgaatgccgtagtgcttggtatta 263

                                                                       
Query: 64  tgtttttatatgccattgccagctactcttttctttaattgtaaattggataaaaacaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtttttatatgccattgccagctactcttttctttaattgtaaattggataaaaacaga 323

                                                                       
Query: 124 atattcagaaggttatcctatcttctcaaaaaataaacatgtttctgtcaaatatatttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atattcagaaggttatcctatcttctcaaaaaataaacatgtttctgtcaaatatatttt 383

                                                                       
Query: 184 taatttttctaccaaacttagtctttcatgatttatcacaagcatatgagactataacag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatttttctaccaaacttagtctttcatgatttatcacaagcatatgagactataacag 443

                                                                       
Query: 244 acttttcttttcttcctaccaatataaatatgtgttccttctgtacatatatacccatgt 303
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 444 acttttcttttcttcctaccaatataaatatgtgttccttctgtacatatgtacccatgt 503

                                                                       
Query: 304 ttgtgtatgtgcatggactcattgcacatatacacaaacacatataaacactcatacaca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgtgtatgtgcatggactcattgcacatatacacaaacacatataaacactcatacaca 563

                                                                       
Query: 364 ctcaataaaaagagcatttaaagagaaatgatcaaacagggtcaatactaatttaaaata 423
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcaataaaaagagtatttaaagagaaatgatcaaacagggtcaatactaatttaaaata 623

                                                                       
Query: 424 gaa----------------------------aagattttgttcaaactgtagtctctctc 455
           |||                            |||||||||||||||||||||||||||||
Sbjct: 624 gaactccaaatgggcacctattcagtgctctaagattttgttcaaactgtagtctctctc 683

                                                                       
Query: 456 tctctctctctctctctctctctctctctctctctctctctctctcttgttctctctctc 515
           |||||||||||||||||||||||||||||||||||||||||      |||||||||||||
Sbjct: 684 tctctctctctctctctctctctctctctctctctctctct------tgttctctctctc 737

                                                                       
Query: 516 tctgtcttgctctctctctctctccccctatctcttccctcctcaaatctacatttacta 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tctgtcttgctctctctctctctccccctatctcttccctcctcaaatctacatttacta 797

                                                                       
Query: 576 tacatatttacctactgttaataatcatgtttgtgtgtgtacattttttaagatgtgtct 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tacatatttacctactgttaataatcatgtttgtgtgtgtacattttttaagatgtgtct 857

                         
Query: 636 atgatatgctgtca 649
           ||||||||||||||
Sbjct: 858 atgatatgctgtca 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)