Query= MSMg01no298_b02.b1 MSMg01no298_b02.b1 CHROMAT_FILE:
MSMg01no298_b02.b1 PHD_FILE: MSMg01no298_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:40 2005
(465 letters)
>mm_chr3_138858842_138859707
Length = 866
Score = 832 bits (430), Expect = 0.0
Identities = 461/478 (96%), Gaps = 13/478 (2%)
Strand = Plus / Minus
Query: 1 ggatgattatctaccatcacaaaccttaaaagaatacaggatatttcatagatccataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggatgattatctaccatcacaaaccttaaaagaatacaggatatttcatagatccataga 552
Query: 61 cattaacagactattgttggtgcaggttctaaaggcataagcaattcaatgacaaggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cattaacagactattgttggtgcaggttctaaaggcataagcaattcaatgacaaggaac 492
Query: 121 taataaaagccatggaatggcatatggtgactatttcagtggaaattaaacccaaatagg 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taataaaagtcatggaatggcatatggtgactatttcagtggaaattaaacccaaatagg 432
Query: 181 tctaataatgagcacaaattgtgttcatatgtcttatgcatttaactaagtcgctgcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 431 tctaataatgagcacaaattgtgttcatatgtcttatgcatttaactaagtagctgcact 372
Query: 241 ttttttt-gttttacaaagctaattcttttaaaacaatttaacatttgacaagaactgtg 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttttttttgttttacaaagctaattcttttaaaacaatttaacatttgacaagaactgtg 312
Query: 300 atgcacttgcacagctgggttgtttgtttttttctgtttcttatttttgttgtttttgtt 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 311 atgcacttgcacagctgggttgtttgtctttttctgtttcttatttttgttgtttttgtt 252
Query: 360 ttttacgtgcccaaatttatctaggttagcttcaacctataaggtttttct-ttt----- 413
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 251 ttttaggtgcccaaatttatctaggttagcttcaacctataaggtttttctgtttgtttg 192
Query: 414 ------tgtttgtttgtttgtttgtttgggtttggatggaggtgtgtggattaagaca 465
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tttgtttgtttgtttgtttgtttgtttgggtttggatggaggtgtgtggattaagaca 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space: 389480
Effective search space used: 389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_b02.g1 MSMg01no298_b02.g1 CHROMAT_FILE:
MSMg01no298_b02.g1 PHD_FILE: MSMg01no298_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:40 2005
(616 letters)
>mm_chr3_138684667_138685682
Length = 1016
Score = 1168 bits (604), Expect = 0.0
Identities = 610/612 (99%)
Strand = Plus / Plus
Query: 1 cacttccttgtattttttcacttgtttctgcatctgaaagaaagaaaaaatgccttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttccttgtattttttcacttgtttctgcatctgaaagaaagaaaaaatgccttctat 260
Query: 61 taagttcagtaatacaaatgtgaactattcaaatgacagcaaatgactcaagaacttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagttcagtaatacaaatgtgaactattcaaatgacagcaaatgactcaagaacttccc 320
Query: 121 ctacctataatgaaagctcactcatatacattggacctttcctctaaactatcttttgct 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ctacctataatgaaagctcactcatacacattggacctttcctctaaactatcttttgct 380
Query: 181 gaataagctgcctttacctccagatttaatgtgcacaattcactacagcactatttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaataagctgcctttacctccagatttaatgtgcacaattcactacagcactatttgttt 440
Query: 241 atttccagtcataccacaaagagagttttcttaatccatcaaccacaggacaaccactta 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttccagtcataccacaaatagagttttcttaatccatcaaccacaggacaaccactta 500
Query: 301 tttttagtcttagtttcaatggtatcaattcaggacaggaagttttttcctacatccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttagtcttagtttcaatggtatcaattcaggacaggaagttttttcctacatccttt 560
Query: 361 gtgaattcttagagcttgaacagtataattttatatattttttatggttccctataaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaattcttagagcttgaacagtataattttatatattttttatggttccctataaagg 620
Query: 421 catagtaccttgaaaatatcaatgataatgagtaaaactcctacctcataaacattttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catagtaccttgaaaatatcaatgataatgagtaaaactcctacctcataaacattttat 680
Query: 481 gtaatgagtgatagctaagattacatacttccatatgatggccacattttaatataactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtaatgagtgatagctaagattacatacttccatatgatggccacattttaatataactt 740
Query: 541 gttagaaatgctattaatataaagatctaggaaataaactccatgatattcaaaactctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttagaaatgctattaatataaagatctaggaaataaactccatgatattcaaaactctg 800
Query: 601 cttggtgataca 612
||||||||||||
Sbjct: 801 cttggtgataca 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
