CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAGAAGAGTGACGAGAGTTGCATACAAGACTGCATGTGTTACTTC
CCAGCTTCAGATGTTTTATAACCTACTGTTTGTGCAACATAGCCATACAC
AGCCTTTTATTTTTCATTTCAAATTAGTAAATTAAAAATATATAAATTTT
AGAAGTTAAATTGTTAATTCAGAAAACTAAGTCTATAGCTCNNNCTATGN
NACTCANNNTATCACTANNTTTACTCTTGGAATTGGCTCATTAGTTTTGG
GGTTGGAAAATTTTCCCCGGAATTACCAAAAAGAAAACCGGCTGTGTTAA
AAACACTTTCTTTGCCCCGCCCGACGGTGGATCCGTAGACGTTAATCACA
GATAAAAACCCCACTAGCCGAAGAACGAGTATACCTCCCTATAAAACCGC
ATAACCACAACAGTCCTACTCTCCACGACTCTCCCCCCCCTATTCCAATT
ATCGAAGTCACATACCCCCCCTCCCCCGATCCCCTAAAAAAATAACACGC
AATACCTCCCCCCCCCCCATCTTATTCTTATCCCTAATAGTCTCCCCGCC
CCCCCTTTTTCTCCCCACCGTTTATTTTGTTCCCCGCCCCCCCCCCCCCA
CCCCCAATATCCTCGCCACTATCCTCCCTTTTTTCCCCCCAAATACCCGC
CCCCCATTTTTATCCCCTTTTAACCCCCTGCTTTTCCCGCTACATTTCTT
TCGTTCTGCCCTTTCTCCTCACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTC
CCGAATTCTTTACACAAACATGAGATAGATTTTTGGTATACGAATTACAA
TGCCATATCCTGACTCAAACAAGAAATGAGGGTAGAGAAATCAGCATTCA
AATAACAGTTTACAAAAATATTATGCCTCTTTTTCTTTATGTATATGTAT
ACACACACACACATATATATATATGTGTGTGTGTGTGTGTATATATGTAT
GTATGTATATATGTCATAACTTGGTTTTATACATATGTATTTCTGTACAT
ATATAGTGATTTATTTATATATATTTATGTATAGAATATATCATATATGT
ATGTTTATATATTCTGTATATATCATATATATGTAAATGTATACAGAAAT
ATGTTATATATAAATGTGAATATATATGTACAATCACTTGGATATGTCCT
CCAAATGCTAACATTTAAATGTATAAAATATGAAAATACAAGCCTGTTAT
TTTAAATTACATTTAAGTAACCAGATAGCTGTTTTGGTTCATTTATTTTA
ACTAATGTCATTTCAGCTCTTGTGATGTATATGCAGCAGAGTTTGTGTGA
GAGGAGGAATGTGCTCAATGTCCTACTGAATATCTCCTCCATATTAGAAA
ATGCGTTAAACCATTGTATATGTTACCTTGTCAACCCCCCCCCTCCATGT
CTTGGTGAGGCCATATTGTTTAAATCCCCTATATTC

Query= MSMg01no298_c01.g1 MSMg01no298_c01.g1 CHROMAT_FILE:
MSMg01no298_c01.g1 PHD_FILE: MSMg01no298_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:44 2005
         (511 letters)



>mm_chr3_48368740_48369650
          Length = 911

 Score =  706 bits (365), Expect = 0.0
 Identities = 365/365 (100%)
 Strand = Plus / Minus

                                                                       
Query: 147 tatgtatacacacacacacatatatatatatgtgtgtgtgtgtgtgtatatatgtatgta 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tatgtatacacacacacacatatatatatatgtgtgtgtgtgtgtgtatatatgtatgta 852

                                                                       
Query: 207 tgtatatatgtcataacttggttttatacatatgtatttctgtacatatatagtgattta 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tgtatatatgtcataacttggttttatacatatgtatttctgtacatatatagtgattta 792

                                                                       
Query: 267 tttatatatatttatgtatagaatatatcatatatgtatgtttatatattctgtatatat 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tttatatatatttatgtatagaatatatcatatatgtatgtttatatattctgtatatat 732

                                                                       
Query: 327 catatatatgtaaatgtatacagaaatatgttatatataaatgtgaatatatatgtacaa 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 catatatatgtaaatgtatacagaaatatgttatatataaatgtgaatatatatgtacaa 672

                                                                       
Query: 387 tcacttggatatgtcctccaaatgctaacatttaaatgtataaaatatgaaaatacaagc 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tcacttggatatgtcctccaaatgctaacatttaaatgtataaaatatgaaaatacaagc 612

                                                                       
Query: 447 ctgttattttaaattacatttaagtaaccagatagctgttttggttcatttattttaact 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgttattttaaattacatttaagtaaccagatagctgttttggttcatttattttaact 552

                
Query: 507 aatgt 511
           |||||
Sbjct: 551 aatgt 547



 Score = 70.3 bits (36), Expect = 3e-16
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 154 acacacacacacatatatatatatgtgtgtgtgtgt 189
           ||||||||||||||||||||||||||||||||||||
Sbjct: 869 acacacacacacatatatatatatgtgtgtgtgtgt 904


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)