Query= MSMg01no298_o01.b1 MSMg01no298_o01.b1 CHROMAT_FILE:
MSMg01no298_o01.b1 PHD_FILE: MSMg01no298_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:39 2005
(548 letters)
>mm_chr3_32628565_32629512
Length = 948
Score = 762 bits (394), Expect = 0.0
Identities = 417/428 (97%), Gaps = 6/428 (1%)
Strand = Plus / Plus
Query: 121 tggggacctctctttatataagaccgctaatatatccacaggagaggagttttaaaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggacctctctttatataagaccgctaatatatccacaggagaggagttttaaaggtc 380
Query: 181 ccgagaggggaaaccaggccacccgtctccactcttagaagtcagtataatcatgtacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgagaggggaaaccaggccacccgtctccactcttagaagtcagtataatcatgtacca 440
Query: 241 gacaattcgtccaaagatgtcccttctccaagcaccgggtctgggtttttcttgaccggt 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gacaattcgtccaaagatgtcccttctccaagcaccgggtctgggcttttcttgaccggt 500
Query: 301 ctgaagaagccttagagcatcttccctctcctggacaactttatctaagttatccatgga 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ctgaagaagccttagagcatcttccctctcctggacaactttatctacgttatccatgga 560
Query: 361 atcaacgacctgcggtgagaagaagacagctaactttagccgtcacctgcaactgcattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcaacgacctgcggtgagaagaagacagctaactttagccgtcacctgcaactgcattc 620
Query: 421 caaaagaactctaggggatccacaaagcgggaacttgtatttttttttttttttttttag 480
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||
Sbjct: 621 caaaagaactctagggcatccacaaagcgggaacttgtactttttttttttt------ag 674
Query: 481 aaaccaccctttactgtacttcataagaagcctttgatgagtgttcacgggtgtctgttg 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaaccaccctttactgtacttcgtaagaagcctttgatgagtgttcacgggtgtctgttg 734
Query: 541 catgactc 548
||||||||
Sbjct: 735 catgactc 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_o01.g1 MSMg01no298_o01.g1 CHROMAT_FILE:
MSMg01no298_o01.g1 PHD_FILE: MSMg01no298_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:39 2005
(551 letters)
>mm_chr3_32799921_32800871
Length = 951
Score = 600 bits (310), Expect = e-175
Identities = 322/326 (98%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 1 ttcatgacttccatgtgattcagctcagttgcattggaagtgggattgcttgagtggtac 60
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 ttcacgacttccatgtgattcagctcagttgcattagaagtgggattgcttgagtggtac 266
Query: 61 ctgggtatcaagtacctggaggggctctcaatgggctctgtccagagaccaaacactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgggtatcaagtacctggaggggctctcaatgggctctgtccagagaccaaacactgct 206
Query: 121 ggaagttagtctggtgtggtgtataacgaatgctaaattttgaaccccaagatctggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaagttagtctggtgtggtgtataacgaatgctaaattttgaaccccaagatctggttg 146
Query: 181 cccccagacaagtgaattctcgggtacaccagctccccaatttgctgtgtaaacattgct 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145 -ccccagacaagtgaattctcaggtacaccagctccccaatttgctgtgtaaacattgct 87
Query: 241 ccccaattttagacaaaagggagagaagaagaagaaagaggagaaagaggagggagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ccccaattttagacaaaagggagagaagaagaagaaagaggagaaagaggagggagagag 27
Query: 301 caggtctccattagatatgatgggcc 326
||||||||||||||||||||||||||
Sbjct: 26 caggtctccattagatatgatgggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
