Query= MSMg01no299_l16.b1 MSMg01no299_l16.b1 CHROMAT_FILE:
MSMg01no299_l16.b1 PHD_FILE: MSMg01no299_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:44 2005
(643 letters)
>mm_chr3_92953482_92954524
Length = 1043
Score = 1208 bits (625), Expect = 0.0
Identities = 639/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Plus
Query: 1 tttcaaagctgttttatctctggtatctgtccattgcatcaataaaggcttagaagctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaaagctgttttatctctggtatctgtccattgcatcaataaaggcttagaagctgg 260
Query: 61 ccccagtgtgttagtcaatacctactgatgcgataaactgagggctctagagttctaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccccagtgtgttagtcaatacctactgatgcgataaactgagggctctagagttctaatg 320
Query: 121 ttgaactgaacatagccccacctctcaaggaacactgggttgaaagaatgtatgtgaccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ttgaactgaacatagccccacctctcaaggaacactgggttgaaagaatgtatgcgaccc 380
Query: 181 tagagttagaaagagctgaatagaggagagagcacattttatacttggcagaggtgggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagttagaaagagctgaatagaggagagagcacattttatacttggcagaggtgggtc 440
Query: 241 agggatgccttcttccataagatgattatttgtaatagccctcaatggaccactaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggatgccttcttccataagatgattatttgtaatagccctcaatggaccactaagaaa 500
Query: 301 tacaaatacaattactgtcattcatttcctctaattctagaatgttaagactctattcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacaaatacaattactgtcattcatttcctctaattctagaatgttaagactctattcct 560
Query: 361 atgcaaggtcacagaggttattacaaaatggatgaagaccctccagagctgtgctgggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcaaggtcacagaggttattacaaaatggatgaagaccctccagagctgtgctgggaa 620
Query: 421 gggatgaggtcatgcattcccagggacttagtcactagtgagaggccctaatcttcccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggatgaggtcatgcattcccagggacttagtcactagtgagaggccctaatcttcccct 680
Query: 481 cccattctgtgccaacacttcccctccatgttgccctacttgctgggtatcaacaagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccattctgtgccaacacttcccctccatgttgccctacttgctgggtatcaacaagctg 740
Query: 541 tataacagaaactctcaactattcttttactttaaaa-ttaccagggaggtaagagtttt 599
|||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 741 tatagcagaaactctcaactattcttt-actttaaaaattaccagggaggtaagagtttt 799
Query: 600 tcattttgtttttattggnatatgtatgtacctgggtcaatgca 643
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 800 tcattttgtttttattggtatatgtatgtacctgggtcaatgca 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_l16.g1 MSMg01no299_l16.g1 CHROMAT_FILE:
MSMg01no299_l16.g1 PHD_FILE: MSMg01no299_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:44 2005
(648 letters)
>mm_chr3_93123793_93124840
Length = 1048
Score = 1245 bits (644), Expect = 0.0
Identities = 647/648 (99%)
Strand = Plus / Minus
Query: 1 ttaccttcagaatttggtgaaactctgttaccagaagttctttcatctcttctttgctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ttaccttcagaatttggtgaaactctgttaccagaagttctttcatctcttctttgctta 789
Query: 61 acatgtcacagttcccatattcagtggcatactggtagaaaacatcgatgacagtgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 acatgtcacagttcccatattcagtggcatactggtagaaaacatcgatgacagtgacaa 729
Query: 121 tgctttccaggagtttaggcatcttgttgcaaattcaagttaacctagatgagggaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tgctttccaggagtttaggcatcttgttgcaaattcaagttaacctagatgagggaacaa 669
Query: 181 gagatccatctctaacttattgcttaaacacataaatagttccaatcatttgtaattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gagatccatctctaacttattgcttaaacacataaatagttccaatcatttgtaattatt 609
Query: 241 gtcagcatgattaatttctttctgtactagttgagaatgaatccagagtggaataacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtcagcatgattaatttctttctgtactagttgagaatgaatccagagtggaataacttg 549
Query: 301 tttcagctatgtagcaagagagtgatgaaattagaacaggatccctatgtcttacttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttcagctatgtagcaagagagtgatgaaattagaacaggatccctatgtcttacttcaa 489
Query: 361 tttctgaatgaatgtaggggagactttgtttattgggctacctgatttgttctggatcta 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttcctgaatgaatgtaggggagactttgtttattgggctacctgatttgttctggatcta 429
Query: 421 tagaaaacccaaatgtgctaatcatccatctcctagctgctttctaagtctcaatcatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tagaaaacccaaatgtgctaatcatccatctcctagctgctttctaagtctcaatcatca 369
Query: 481 cactacaggagacaggcatgtcacctacatagaaagtctaaatccacctcaaaagtacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cactacaggagacaggcatgtcacctacatagaaagtctaaatccacctcaaaagtacca 309
Query: 541 gtggctaacttgggttctcaaagttttttcggacaaagaaggtagaaaaaatgagaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtggctaacttgggttctcaaagttttttcggacaaagaaggtagaaaaaatgagaaaag 249
Query: 601 ctagctatagggttaggtgataggaagctgaggaaggctcctctcaga 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctagctatagggttaggtgataggaagctgaggaaggctcctctcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
