Query= MSMg01no299_o20.b1 MSMg01no299_o20.b1 CHROMAT_FILE:
MSMg01no299_o20.b1 PHD_FILE: MSMg01no299_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:59 2005
(368 letters)
>mm_chr3_101850404_101851171
Length = 768
Score = 640 bits (331), Expect = 0.0
Identities = 346/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 3 gaattcctaaatgtttactcttggctatcttcaacttcttccttcagaattatcctagaa 62
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaattcctaaatgctcactcttggctatcttcaacttcttccttcagaattatcctagaa 291
Query: 63 atagttctggaatagcctccagaatcaaatgtctctaatgcattgctcttttactaaata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atagttctggaatagcctccagaatcaaatgtctctaatgcattgctcttttactaaata 231
Query: 123 agttcccatcctatttccaatccaaactcctccctccttccctccacccctcccttctcc 182
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 230 agttcccatcctatttccaatccaaactcctccctccttacctccacccctcccttct-t 172
Query: 183 ccccccttcaagttctttctgaattgatttttctccacaccccatgttgtttgttttgca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ccccccttcaagttctttctgaattgatttttctccacaccccatgttgtttgttttgca 112
Query: 243 gaacagaaagactcagaccatagagagtggtgaagcatgactatagtcccagcactcagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gaacagaaagactcagaccatagagagtggtgaagcatgactatagtcccagcactcagg 52
Query: 303 aagctgaggcaggagagtagtcacaagttggagtctagcctgaactacaga 353
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 aagctgaggcaggagagtagtcacaagttggagtctagcctgaactacaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_o20.g1 MSMg01no299_o20.g1 CHROMAT_FILE:
MSMg01no299_o20.g1 PHD_FILE: MSMg01no299_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:59 2005
(288 letters)
>mm_chr3_101687066_101687753
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Plus
Query: 1 actgcaggcaagctcctggcagatggaatgctgcttgcttgctttcttgcctgctcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgcaggcaagctcctggcagatggaatgctgcttgcttgctttcttgcctgctcacac 260
Query: 61 ccttccaagacattcctgtttatggaacacgaattccaaggagacaagactacttacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttccaagacattcctgtttatggaacacgaattccaaggagacaagactacttacaaa 320
Query: 121 gataagagaaagaccaatgttccctgaaggttgaccagaacagctagggtcctccaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataagagaaagaccaatgttccctgaaggttgaccagaacagctagggtcctccaggag 380
Query: 181 cggatgaagtaccctaatagggcatactgcgcgatgccaacagcgaagaagagaccacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggatgaagtaccctaatagggcatactgcgcgatgccaacagcgaagaagagaccacca 440
Query: 241 atcgatcctatagcagggaaaagagaattgtcactggagaagatcacc 288
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcgatcctaaagcagggaaaagagaattgtcactggagaagatcacc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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