XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
CCTGATGACTCACTGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGACTAAGATCAAAAATTCAGGTGACAGCAGATGCTG
GCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
AGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGGTACTCAGAAAATTG
GACATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGCATATATCC
AGAAGATGTCCCAACCGGTAAGAAGAACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTATAC
TCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGA
CCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCAC
ACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACTTAGGATACC
CAAGATATAAGATACAATTTGCTAAACGCATGAAACTCAAGAAGAACGAA
GACCAAAGTGTGGACGCTTTGCCCCTTCTTAGAATTGGGAACAAAACACA
CATGGAAGGAGTN

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXACATCAGCCAGAAGACCCATCAGTCATGTAG
CATAGACCCTCCCTCTTCTCTGCAACCTATAGGAAGTGACCTCCAATCTG
TCACATGGGCCTGGTCTCCTCAGAGCCTTGCCATAGAGCTTTCTCTCTAT
GGTATTGGGGACTGATATCCTAAGAGCTCCCTAGTGCTGTGTATCCATGG
TGTTGGGGTCTGATATCCCCAGTGTCTCCCTCAGGGATTCCATGGGATTA
ATGTCTCTTTGAGTAAATCTATTATCAAAAAGACAATAGGATTTAATGTC
ACCTTTGAACTCCAAACTTGAGACCATTCCAGGGCAAAAGGACACACACA
CACACACACACACACACACACACACACACACACACACACACACATTTCTT
CCTTTCCACCATCCCTGGCACTCTACATTCTTAAGAGTTATATGATTTTA
CCCTGGCCATTCCCTCCTCATGATTCCTCTCAGAACAGCATCAGGTATAA
TGCATACCCGAGCGTCATTAGCTCACAGTGAAGAAAATGATATAACTAGA
ATGGTAAAGTGGAGAGAGTAGCAGAGCCATTGGGATGGGCAGCAGCTTAT
AGTCCACTGTATTTGGAATGTACTGGTTACTTTTGCTTCACTGTGACCAA
ACCACTGACACAAACAAGTTACAGGAAGTAAAGTTTATTTAGCTCATGAT
TTTAGAGGA

Query= MSMg01no300_i23.g1 MSMg01no300_i23.g1 CHROMAT_FILE:
MSMg01no300_i23.g1 PHD_FILE: MSMg01no300_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:44 2005
         (686 letters)



>mm_chr3_82365809_82366894
          Length = 1086

 Score = 1268 bits (656), Expect = 0.0
 Identities = 673/686 (98%), Gaps = 12/686 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatcagccagaagacccatcagtcatgtagcatagaccctccctcttctctgcaaccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatcagccagaagacccatcagtcatgtagcatagaccctccctcttctctgcaaccta 260

                                                                       
Query: 61  taggaagtgacctccaatctgtcacatgggcctggtctcctcagagccttgccatagagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggaagtgacctccaatctgtcacatgggcctggtctcctcagagccttgccatagagc 320

                                                                       
Query: 121 tttctctctatggtattggggactgatatcctaagagctccctagtgctgtgtatccatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctctctatggtattggggactgatatcctaagagctccctagtgctgtgtatccatg 380

                                                                       
Query: 181 gtgttggggtctgatatccccagtgtctccctcagggattccatgggattaatgtctctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttggggtctgatatccccagtgtctccctcagggattccatgggattaatgtctctt 440

                                                                       
Query: 241 tgagtaaatctattatcaaaaagacaataggatttaatgtcacctttgaactccaaactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtaaatctattatcaaaaagacaataggatttaatgtcacctttgaactccaaactt 500

                                                                       
Query: 301 gagaccattccagggcaaaaggacacacacacacacacacacacacacacacacacacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaccattccagggcaaaaggacacacacacacacacacacacacacacacacacacac 560

                                                                       
Query: 361 acacacacacacacatttcttcctttccaccatccctggcactctacattcttaagagtt 420
           |||            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aca------------tttcttcctttccaccatccctggcactctacattcttaagagtt 608

                                                                       
Query: 421 atatgattttaccctggccattccctcctcatgattcctctcagaacagcatcaggtata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atatgattttaccctggccattccctcctcatgattcctctcagaacagcatcaggtata 668

                                                                       
Query: 481 atgcatacccgagcgtcattagctcacagtgaagaaaatgatataactagaatggtaaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atgcatacccgagcgtcattagctcacagtgaagaaaatgatataactagaatggtaaag 728

                                                                       
Query: 541 tggagagagtagcagagccattgggatgggcagcagcttatagtccactgtatttggaat 600
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tggagagagtaacagagccattgggatgggcagcagcttatagtccactgtatttggaat 788

                                                                       
Query: 601 gtactggttacttttgcttcactgtgaccaaaccactgacacaaacaagttacaggaagt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gtactggttacttttgcttcactgtgaccaaaccactgacacaaacaagttacaggaagt 848

                                     
Query: 661 aaagtttatttagctcatgattttag 686
           ||||||||||||||||||||||||||
Sbjct: 849 aaagtttatttagctcatgattttag 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)