XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGTG
AGAAATACCTCTTTGTCTAGCAATTATATGTATTTGCCATTAGAAATTTC
TTTTATAGACTAGAGCAATATCTTATCTTTTGTTGCTAAAGAAGACTAAG
GGCTTTGTGATTTAATATCAGTTGCAAATCTACCTCAGAACTAAAGAATG
TGATTGGATACCACATGTGGGCCTCTGATTTTGCTCTAGGCAAAGTAATG
TAAAGAGTATTTATGCTTTGGGAATGACTACCTGGTAGTGCTTCTTAAGT
CTGTGAAATGGGCCACCTGGGTTTTTTCTCAAAGACCAATAAAGCTATAT
GAATTCAGCTTTCATGGTTTTTTAGAATTTTATACCTTTTGACATATCAC
ATTTGTTAGGAAGTATAAGTAGTGCACTTAATCCCAGGTATACTTGTCTT
TCTCTTTCTCTTTCTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTT
CCTTTCCTTTCCTTTCCTTTCCTTTCTTTTTTTTTTAATGCAAAAGCAAG
AACTTTATTTCCCGTGTATTGGGGTCGACCTTCAATTAGTCCCTCAAGGT
GAGTGACTAAAAGGTGACCCACATGGTTATTACAAGAAAATTTTATANCT
TTAAGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTAGAAAGTCTTTAATTTCTTTCTTTATTTCTTCCCT
CACCCAGTGATCATTGCGTAGAGAGTTGTTCAATTTCCATGAGTATATGG
ACTTTCTGGTGTTCCTGTTGTTGTTCAACACCAGGTTTAATCCATGAGGG
CTCCGATAAGATACAAGGTGTTATTTCAATTTTCTTGATTCTGTTGAGGC
TTGCTTTGTGATTGACTATATGACCAATTTTTTTTAGAAGGTTTCATGAG
ATGCTGAGATTTGTTCTTTTGTGTTTGGGTGATATGTTTTGTAGATGTCT
GTTATGTCCATTTGGTTCATAATGCCAGTTAGTCTCATTATTTCTCTGTT
TAGTTTTAATCTGGATGACCTGTTGATTGATAAGAGTGGGGTCCTGAATT
CTCACACTATTAATGTGTGGGGGTTTTTTGTACATTTTANGCTTTTGCAA
TATTTCTTTTACAACCGTAAATGCCCTTGTATTTGATGCACATATGTTCC
AAATTCACATATTATTCATGATAGGTTTTTCCTTTTAACAAAGGAAGTGC
CCTTCTCTGTTCATTTTGTTTTTTTTTTCCAGAGTGTCTATTCTATTACA
TATGACTAAGGCTATTTCCCTGCTTCAACATGGTTACACGTTTTTTGCCA
CAATTACTTCATATTTTTTACTTGTAAGAATGATCCTCATTCACACCACA
TTTTG

Query= MSMg01no301_j20.b1 MSMg01no301_j20.b1 CHROMAT_FILE:
MSMg01no301_j20.b1 PHD_FILE: MSMg01no301_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:03 2005
         (633 letters)



>mm_chr3_61734640_61735672
          Length = 1033

 Score =  994 bits (514), Expect = 0.0
 Identities = 588/630 (93%), Gaps = 38/630 (6%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgtgagaaatacctctttgtctagcaattatatgtatttgccattagaaattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattcctgtgagaaatacctctttgtctagcaattatatgtatttgccattagaaattt 552

                                                                       
Query: 65  cttttatagactagagcaatatcttatcttttgttgctaaagaagactaagggctttgtg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cttttatagactagagcaatatcttatcttttgttgctaaagaagactaagggctttgtg 492

                                                                       
Query: 125 atttaatatcagttgcaaatctacctcagaactaaagaatgtgattggataccacatgtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atttaatatcagttgcaaatctacctcagaactaaagaatgtgattggataccacatgtg 432

                                                                       
Query: 185 ggcctctgattttgctctaggcaaagtaatgtaaagagtatttatgctttgggaatgact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggcctctgattttgctctaggcaaagtaatgtaaagagtatttatgctttgggaatgact 372

                                                                       
Query: 245 acctggtagtgcttcttaagtctgtgaaatgggccacctgggttttttctcaaagaccaa 304
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 371 acctggtagtgcttcttaagtctgtgaattgggccacctgggttttttctcaaagaccaa 312

                                                                       
Query: 305 taaagctatatgaattcagctttcatggt-tttttagaattttataccttttgacatatc 363
           |||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 311 taaagctatatgaattcagctttcat-gtctttttagaattttataccttttgacacatc 253

                                                                       
Query: 364 acatttgttaggaagtataagtagtgcacttaatcccaggtatacttgtctttctctttc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acatttgttaggaagtataagtagtgcacttaatcccaggtatacttgtctttctctttc 193

                                                                       
Query: 424 tctttctctttctctctctctctttctctctttctctctttctttctttctttctttctt 483
           ||||||||||||||| | |||||||||||  |||||||| |||  |||||| ||||||||
Sbjct: 192 tctttctctttctct-t-tctctttctct--ttctctctctct--ctttctctctttctt 139

                                                                       
Query: 484 tctttctttctttctttctttctttctttctttctttctttctttcttccttcctttcct 543
           ||||||||||||||||||||||||||||||||||||||||| ||||   ||||||| |||
Sbjct: 138 tctttctttctttctttctttctttctttctttctttcttt-tttc---cttcctt-cct 84

                                                                       
Query: 544 ttcctttcctttcctttcctttcctttcctttcctttcctttcctttcttttttttttaa 603
           | ||||||||||||||||||||| |||                       ||||||||||
Sbjct: 83  t-cctttcctttcctttcctttc-ttt-----------------------ttttttttaa 49

                                         
Query: 604 tgcaaaagcaagaactttatttcccgtgta 633
           ||||||||||||||||||||||||||||||
Sbjct: 48  tgcaaaagcaagaactttatttcccgtgta 19


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)