Query= MSMg01no303_e10.b1 MSMg01no303_e10.b1 CHROMAT_FILE:
MSMg01no303_e10.b1 PHD_FILE: MSMg01no303_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:09 2005
(176 letters)
>mm_chr3_111827089_111827665
Length = 577
Score = 311 bits (161), Expect = 1e-89
Identities = 173/179 (96%), Gaps = 5/179 (2%)
Strand = Plus / Minus
Query: 1 ctagggaaacctcagtaatacacacatggattttgcacaatttaagacca---tgtttta 57
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 377 ctagggaaacctcagtaatacacacatggattttgcacaatttaaga--aaattgtttta 320
Query: 58 gcttttgttctagaataatttttgaagaattagggattggttaataaaataaaaagaatt 117
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 319 gcttttgttctagaataatttttgaagaattagggattgtttaataaaataaaaagaatt 260
Query: 118 ctggcctattctttctttgaaaatccagtggcacacaaaacaaattaaaacaaagaaaa 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctggcctattctttctttgaaaatccagtggcacacaaaacaaattaaaacaaagaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 577
Length adjustment: 8
Effective length of query: 168
Effective length of database: 569
Effective search space: 95592
Effective search space used: 95592
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no303_e10.g1 MSMg01no303_e10.g1 CHROMAT_FILE:
MSMg01no303_e10.g1 PHD_FILE: MSMg01no303_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:09 2005
(285 letters)
>mm_chr3_111660344_111661028
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 1 caataaagaggaagaacattccatatattatttcggtaaatgatcttgcccaaattttgg 60
||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caataaagatgaagaacattctatatattatttcggtaaatgaccttgcccaaattttgg 260
Query: 61 ttattagcgtaatgtaatttaagtagattttttaaataacctgaatcaagagcattaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattagcgtaatgtaatttaagtagattttttaaataacctgaatcaagagcattaata 320
Query: 121 atctttccaaactgatcagtcctgggaaagtaaacattgcttctcttttttcgtacattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctttccaaactgatcagtcctgggaaagtaaacattgcttctcttttttcgtacattt 380
Query: 181 atcttgactcaaggatgtctaaatatagtataaaatgtttatacctacaggggtatgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcttgactcaaggatgtctaaatatagtataaaatgtttatacctacaggggtatgttg 440
Query: 241 cagtaaatctctccaacacaaatatgccccagcattgaaaataca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtaaatctctccaacacaaatatgccccagcattgaaaataca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
