Query= MSMg01no305_a17.b1 MSMg01no305_a17.b1 CHROMAT_FILE:
MSMg01no305_a17.b1 PHD_FILE: MSMg01no305_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:29 2005
(410 letters)
>mm_chr3_50735797_50736606
Length = 810
Score = 781 bits (404), Expect = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus
Query: 5 gaattcagccatcatcctaacacaccccaattctaacaggtgtggctttcgagaaaggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagccatcatcctaacacaccccaattctaacaggtgtggctttcgagaaaggtg 264
Query: 65 acaccagcttcttgacatgtctttttatattgtctgctgcaagaatttttttttcccctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaccagcttcttgacatgtctttttatattgtctgctgcaagaatttttttttcccctt 324
Query: 125 gacctgattttgtaatcactttgcttagcaagcaccatatttggaagtcttgggctttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacctgattttgtaatcactttgcttagcaagcaccatatttggaagtcttgggctttca 384
Query: 185 gttccacagaagctcctgaaaatagaaatattcttcttattcacgtatagcaaatgtctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttccacagaagctcctgaaaatagaaatattcttcttattcacgtatagcaaatgtctc 444
Query: 245 attcccacccctaaagagtctaggttaattgcctcacttaataacccacagcagcaaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attcccacccctaaagagtctaggttaattgcctcacttaataacccacagcagcaaatc 504
Query: 305 ctacagcctaatttgatatcgctctagaaaaaaataaaaataaaaagctctttctgtaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctacagcctaatttgatatcgctctagaaaaaaataaaaataaaaagctctttctgtaaa 564
Query: 365 accgggcttctaagttagactacagagaaagatattgtgtgtta 408
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accgggcttctaagttagactacagagaaagatattgtgtgtta 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_a17.g1 MSMg01no305_a17.g1 CHROMAT_FILE:
MSMg01no305_a17.g1 PHD_FILE: MSMg01no305_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:29 2005
(399 letters)
>mm_chr3_50892159_50892957
Length = 799
Score = 596 bits (308), Expect = e-174
Identities = 349/374 (93%), Gaps = 20/374 (5%)
Strand = Plus / Minus
Query: 1 attatgtagctaacaaaagatgactctggacttctgatctcccgttctctactctcctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 attatgtagctaacaaaagatgactctggacttctgatctcccgttctctactctcctag 635
Query: 61 cacgggggggggggggttacaagcacttaccactgtgtgtggattatatattgctgggga 120
||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 634 cac--------gggggttacaagcactcaccactgtgtgtggattatatattgctgggga 583
Query: 121 ttaaacccagagcgtctgacatgctaggcaaattctgtactaggctgtattctcatctca 180
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 582 ttaaacccagagcatcagacatgctaggcaaattctgtactaggctgtattctcagctca 523
Query: 181 gaagctgtgacctctaagatctcattagcagatttctagcaactctcagactgtagtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaagctgtgacctctaagatctcattagcagatttctagcaactctcagactgtagtctc 463
Query: 241 tctatcttctccctattcttcggagctcttccagatcctaggtaaacggcaagtggttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tctatcttctccctattcttcggagctcttccagatcctaggtaaacggcaagtggttgg 403
Query: 301 ccttgtgatgcagcccccccccccccttttttttg--cccactcttggggttctcagttt 358
||||||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 402 ccttgtgatgcaggccccccccc----------tgggcccactcttggggttctcagttt 353
Query: 359 cataataagagaat 372
||||||||||||||
Sbjct: 352 cataataagagaat 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
