Query= MSMg01no306_c14.b1 MSMg01no306_c14.b1 CHROMAT_FILE:
MSMg01no306_c14.b1 PHD_FILE: MSMg01no306_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:51 2005
(280 letters)
>mm_chr3_104560803_104561482
Length = 680
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%)
Strand = Plus / Plus
Query: 1 cattgaattcacaacgtagttgaaaatgaccccgaacttttgcctttgtttctctgcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgaattcacaacgtagttgaaaatgaccccgaacttttgcctttgtttctctgcctc 260
Query: 61 ctgagtgctgggattgcagacatgcaccataagctaggtttctgctgtgggaataaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagtgctgggattgcagacatgcaccataagctaggtttctgctgtgggaataaactt 320
Query: 121 ggagattcatgcctattaaacaagcactaactctatcatccgagagacgtcctcagctcc 180
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagatttgtgcctattaaacaagcactaactctatcatccgagagacgtcctcagctcc 380
Query: 181 aacatgaaatcctgatcatggaagtactgtttacaagtgtgtgaaaactcaactaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatgaaatcctgatcatggaagtactgtttacaagtgtgtgaaaactcaactaaacat 440
Query: 241 ccacttcaaataacagtattttattgcatgtaaaatgcat 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacttcaaataacagtattttattgcatgtaaaatgcat 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no306_c14.g1 MSMg01no306_c14.g1 CHROMAT_FILE:
MSMg01no306_c14.g1 PHD_FILE: MSMg01no306_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:51 2005
(292 letters)
>mm_chr3_104733615_104734302
Length = 688
Score = 526 bits (272), Expect = e-154
Identities = 286/292 (97%), Gaps = 4/292 (1%)
Strand = Plus / Minus
Query: 1 atcagtgagttagtgggatggatccccaaagaccacctttaagtcttctgtgacaacacc 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 488 atcagtgagttagtgggatggatccccaaagaccacctttaagtctt---tgacaaca-c 433
Query: 61 ctccaagctttgctaagaagaaagctctttctgcagcacagaactaaaaggagccagact 120
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 ctccaaggtttgctaagaagaaagctctttctgcagcacagaactgaaaggagccagact 373
Query: 121 gggtgaagattggctcgctaaggaaagggtagtactgctcttaaataaagaggctccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gggtgaagattggctcgctaaggaaagggtagtactgctcttaaataaagaggctccttt 313
Query: 181 cagataagcagaatcagattctcagagctggtttgctggctaccctttctttgaaccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagataagcagaatcagattctcagagctggtttgctggctaccctttctttgaaccctc 253
Query: 241 atatttaacccagcaggcttcaaagcaggtgagaaaatgacctaccacttaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atatttaacccagcaggcttcaaagcaggtgagaaaatgacctaccacttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 688
Length adjustment: 9
Effective length of query: 283
Effective length of database: 679
Effective search space: 192157
Effective search space used: 192157
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
