Query= MSMg01no306_e20.b1 MSMg01no306_e20.b1 CHROMAT_FILE:
MSMg01no306_e20.b1 PHD_FILE: MSMg01no306_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:02 2005
(189 letters)
>mm_chr3_84219875_84220463
Length = 589
Score = 335 bits (173), Expect = 1e-96
Identities = 185/189 (97%)
Strand = Plus / Plus
Query: 1 aaagatggacaggctgcttcttgttttcttgttgacctagagaccgaagaagcaggtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagatggacaggctgcttcttgttttcttgttgacctagagaccgaagaagcaggtcaa 260
Query: 61 acagtcctgtcagaagcaggcagggatgggtgtgaggccctggcctcctacagaggcatg 120
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 acagtcctgtcaaaagcaggcagggatgggcgtgaggccctggcctcctacagaggcatg 320
Query: 121 gggctagagaagcaacttttgaaaataagtttgcaattcagagcaaaagtcaaaaagaaa 180
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 321 gggctagagaagcaacttttgaaaatgagtttgcaattcagagcaaatgtcaaaaagaaa 380
Query: 181 atgtgtcat 189
|||||||||
Sbjct: 381 atgtgtcat 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no306_e20.g1 MSMg01no306_e20.g1 CHROMAT_FILE:
MSMg01no306_e20.g1 PHD_FILE: MSMg01no306_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:03 2005
(292 letters)
>mm_chr3_84387807_84388498
Length = 692
Score = 507 bits (262), Expect = e-148
Identities = 289/308 (93%), Gaps = 16/308 (5%)
Strand = Plus / Minus
Query: 1 tttgggggcaaaaagggacaaaaatgtattagaaaaaaaggagagaaagaagacaggaag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 683 tttgggggcaaaaagggacaaaattgtattagaaaaaaaggagagaaagaagacaggaag 624
Query: 61 aaaaaagaaggaagaaaaaagaaggaaaggaaaataaattttcatttaagtagaaatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaaaaagaaggaagaaaaaagaaggaaaggaaaataaattttcatttaagtagaaatagg 564
Query: 121 tttaaacgtttggtataaaaaattgatctcaagta----------------acacacaca 164
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 563 tttaaacgtttggtataaaaaattgatctcaagtaacacacacacacacacacacacaca 504
Query: 165 cacacacacacgagtgaaaaatttccccaaatccaaagaacacaagcctctgcttccttc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cacacacacacgagtgaaaaatttccccaaatccaaagaacacaagcctctgcttccttc 444
Query: 225 agtccaaatgatgtacagaagtattttgcaatttttcatcaccaactgaagcagatttca 284
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 443 agtccaaatgatgtacagaagtattttgcaattcttcatcaccaacagaagcagatttca 384
Query: 285 gtgtttct 292
||||||||
Sbjct: 383 gtgtttct 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
