Query= MSMg01no306_g01.b1 MSMg01no306_g01.b1 CHROMAT_FILE:
MSMg01no306_g01.b1 PHD_FILE: MSMg01no306_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:08 2005
(596 letters)
>mm_chr3_82261870_82262866
Length = 997
Score = 634 bits (328), Expect = 0.0
Identities = 367/380 (96%), Gaps = 3/380 (0%)
Strand = Plus / Minus
Query: 4 ggaattct-tgtctcttcatcagcttgaactaatccctatttaagaaatagacacaagga 62
|||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggaattctatgtctcatgatcagcttgaactaatccctatttaagaaatagacacaagga 320
Query: 63 aaaggctgaaactgtaatgcagaaatttcctatcataaatctgaatcttttgtctgtcct 122
||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 319 aaaggctgaaactgtaatgcagaaatttcctgccataactctgaatcttttgtcactcct 260
Query: 123 cactgtcaaaggtccattctacagccacaagaagtaatatgaaatgctagagagaaggat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cactgtcaaaggtccattctacagccacaagaagtaatatgaaatgctagagagaaggat 200
Query: 183 ttgggaagt-tgcacagttcctagagcatttgcctaccattcatgcagccctgggttcga 241
||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 199 ttgggaagtat-cacagttcctagagcatttgcctatcattcatgcagccctgggttcga 141
Query: 242 tagcaattcgtgaactaacagcgtagggtgtgtctgtaattctagaacacaaggaggagg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tagcaattcgtgaactaacagcgtagggtgtgtctgtaattctagaacacaaggaggagg 81
Query: 302 aggtaggacaattggaaactcaaagtcatctatctgtaactctgtgatgaatttgaggcc 361
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 80 aggtgggacaattggaaactcaaagtcatctatctgtagctctgtgatgaatttgaggcc 21
Query: 362 ttcctgcactacataaaaat 381
||||||||||||||||||||
Sbjct: 20 ttcctgcactacataaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_g01.g1 MSMg01no306_g01.g1 CHROMAT_FILE:
MSMg01no306_g01.g1 PHD_FILE: MSMg01no306_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:08 2005
(194 letters)
>mm_chr3_82181920_82182513
Length = 594
Score = 352 bits (182), Expect = e-102
Identities = 191/194 (98%)
Strand = Plus / Plus
Query: 1 acagtttatttgctgtttctgggcacgagaatgatgtccatgctccttagcgccatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtttatttgctgtttctgggcacgagaatgatgtccatgctccttagcgccatctga 260
Query: 61 tgagctcacaaatccttctttgaatgcatgtcccctcttccgtccccctaagcttcagca 120
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 261 tgagctcacaaatccttctttgaatgtatgtcccctcttctgtccccctaagcttcagcg 320
Query: 121 tcctctttctgtgtggattgctaactacagcaaggcacgcatgcttttcttcttctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctctttctgtgtggattgctaactacagcaaggcacgcatgcttttcttcttctctgt 380
Query: 181 agaccttcccattg 194
||||||||||||||
Sbjct: 381 agaccttcccattg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
