Query= MSMg01no306_p14.b1 MSMg01no306_p14.b1 CHROMAT_FILE:
MSMg01no306_p14.b1 PHD_FILE: MSMg01no306_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:54 2005
(698 letters)
>mm_chr3_57541410_57542507
Length = 1098
Score = 714 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Minus
Query: 322 gggcctctctttccagtgatggccgactaggccatcttttgatacatatgcagctagagt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 gggcctctctttccagtgatggccgactaggccatcttttgatacatatgcagctagagt 1039
Query: 382 caagagctccggggtactggttagttcataatgttgttccacctatagggttgcagatcc 441
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 taagagctccggggtactggttagttcataatgttgttccacctatagggttgcagatcc 979
Query: 442 ctttagctccttgggtactttctctagctcctcctttgggagccctgtgatccatccaat 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 ctttagctccttgggtactttctctagctcctcctttgggagccctgtgatccatccaat 919
Query: 502 agctgactgtgagcatccacaagtcaaacagtggaaatcactactttggcttactcattt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 agctgactgtgagcatccacaagtcaaacagtggaaatcactactttggcttactcattt 859
Query: 562 tgctttcagctatacattattagttcctaacttcaaaatgtccaaagtcatgttttattt 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 tgctttcagctatacattattagttcctaacttcaaaatgtccaaagtcatgttttattt 799
Query: 622 taaaagccatgttttattttaaaagccaactacttttagttaatgctaacatgacataag 681
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 798 taaaagccatgttttattttaaaagccaactacttttagttaatactaacatgacataag 739
Query: 682 tatgtcatatgatttta 698
|||||||||||||||||
Sbjct: 738 tatgtcatatgatttta 722
Score = 83.9 bits (43), Expect = 4e-20
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 123 acaagtcaaacagtggaaatcactactttggcttactcatttt 165
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 acaagtcaaacagtggaaatcactactttggcttactcatttt 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_p14.g1 MSMg01no306_p14.g1 CHROMAT_FILE:
MSMg01no306_p14.g1 PHD_FILE: MSMg01no306_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:54 2005
(671 letters)
>mm_chr3_57425379_57426449
Length = 1071
Score = 1220 bits (631), Expect = 0.0
Identities = 661/671 (98%)
Strand = Plus / Plus
Query: 1 tttaaagcatcagtcatcagtccgctgggtaagcatgtatcttgactgtaaaattcctgt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttaaagcatcagtcatcagtccgctgggtaagcatgtatcttgattgtaaaattcctgt 260
Query: 61 agaaaattaggaacttaaccatggtctgtgggttattaggcagaaaggcagctctgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaattaggaacttaaccatggtctgtgggttattaggcagaaaggcagctctgggaa 320
Query: 121 gggaagatcaaataaattctcaacaaaacaaaacaaacaaaaaaaccaaacaaaaccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaagatcaaataaattctcaacaaaacaaaacaaacaaaaaaaccaaacaaaaccata 380
Query: 181 caacaacaaagcacacttgggagtgggtgattctagcttggttattttgaactggtttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 caacaacaaagcacacttgggagtgggtgattctagcttggttattttgaattggtttca 440
Query: 241 gattttacctgccaggaaagcacggacgtacgtgtgcctgattccttttccccctgtgaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gattttacctgccaggaaagcacgaacgtacgtgtgcctgattccttttccccctgtgaa 500
Query: 301 aatgtcaaaaacagagacgcttacggctcttattaattcatggcttaaacatatacccgc 360
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 501 aatgtcaaaaacagagacgcttacggctcttattaatttatggcttaaacatatactcgc 560
Query: 361 acgttgtatgtatagtttgtctaattctgagtaaacgggcttctaagaacgtgctcctac 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 acgttgtatgtatagtttgtctaattctgagtaaatgggcttctaagaacgtgctcctac 620
Query: 421 ctggaagtgtccaccctgaggcaggacagagaaaggaatataaaactgctcttattctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggaagtgtccaccctgaggcaggacagagaaaggaatataaaactgctcttattctaa 680
Query: 481 agagtgtattgctgtttccgtgttggttaaatatagactcggactgcgtgctctgtttgc 540
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 agagtgtgttgctgtttccgtgttggttaaatttagactcggactgcgtgctctgtttgc 740
Query: 541 tgtgtcctgtttgaactcggctctttcagggatacaagaagttaaggccaagaaaactgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtcctgtttgaactcggctctttcagggatacaagaagttaaggccaagaaaactgg 800
Query: 601 agacccagtcctcaaggtagccatcagcttacgccccttcccttatctacccctatcccc 660
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 801 agacccagtcctcaaggtagccatcagcttacgcccctttcctcatctacccctatcccc 860
Query: 661 atcaccacatt 671
|||||||||||
Sbjct: 861 atcaccacatt 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
