Query= MSMg01no306_p17.b1 MSMg01no306_p17.b1 CHROMAT_FILE:
MSMg01no306_p17.b1 PHD_FILE: MSMg01no306_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:55 2005
(298 letters)
>mm_chr3_148968940_148969637
Length = 698
Score = 553 bits (286), Expect = e-162
Identities = 295/298 (98%)
Strand = Plus / Plus
Query: 1 gtttgttttgctttattttgtttgtaactcaatagttacacttattagtttattaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttgttttgctttattttgtttgtaactcaatagttacacttattagtttattaattaa 260
Query: 61 acctactactaaatagtaggtttaggatatagctcaataatgaagctcttacttagtagc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 acctactactaaatagtaggtttaggatatagctcaatagtgaagctcttacttagtagc 320
Query: 121 atgtgtgacagagggccttgatgcagttccaagcatagtacattaagaaaagaaaagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgtgacagagggccttgatgcagttccaagcatagtacattaagaaaagaaaagtta 380
Query: 181 ttatatttaaaagttgggtgtgattactcatgcctaaaatcatcacgtgtgaaaggccga 240
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatatttaaaagctgggtgtgatcactcatgcctaaaatcatcacgtgtgaaaggccga 440
Query: 241 ggcaagagaattgctgtgagttccaggccagcctaggttatagagagagaccctgttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcaagagaattgctgtgagttccaggccagcctaggttatagagagagaccctgttt 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_p17.g1 MSMg01no306_p17.g1 CHROMAT_FILE:
MSMg01no306_p17.g1 PHD_FILE: MSMg01no306_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:55 2005
(403 letters)
>mm_chr3_149026865_149027668
Length = 804
Score = 750 bits (388), Expect = 0.0
Identities = 400/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 1 catagaaacatcccccaaaatacaatc-cctgttatgtcatagaggagaaataatatagt 59
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 604 catagaaacatcccccaaaatacaatcacctgttctgtcatagaggagaaataatatagt 545
Query: 60 caaattctcaactaaaggattaagtgatatctgattagtttaagtagacaagggcagact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caaattctcaactaaaggattaagtgatatctgattagtttaagtagacaagggcagact 485
Query: 120 tggtaagcgggtggcacacattctttccaaacagccaaatcgtgctccctgtcttctttc 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 484 tggtaagcgggtggcacacattctttccaaacagccaaatcgtactccctgtcttctttc 425
Query: 180 tcaaataccagggaaacccagtctctttccttgactaggtgccaagacagctatcaccct 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcaaataccagggaaatccagtctctttccttgactaggtgccaagacagctatcaccct 365
Query: 240 agactggggcaggcatctattgagagctttgcagcttttctcagacctgcgctctctcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agactggggcaggcatctattgagagctttgcagcttttctcagacctgcgctctctcca 305
Query: 300 gtgagtgggtcacatacacagacagacagcacagtgtcttgggaaattgaggtcaggagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtgagtgggtcacatacacagacagacagcacagtgtcttgggaaattgaggtcaggagg 245
Query: 360 gaaggtggccctctgccgcccaggtcccccagtaatgttatttc 403
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaaggtggccctctgccgcccaggtcccccagtaatgttatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 804
Length adjustment: 9
Effective length of query: 394
Effective length of database: 795
Effective search space: 313230
Effective search space used: 313230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
