Query= MSMg01no307_e22.b1 MSMg01no307_e22.b1 CHROMAT_FILE:
MSMg01no307_e22.b1 PHD_FILE: MSMg01no307_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:19 2005
(704 letters)
>mm_chr3_7649150_7650253
Length = 1104
Score = 903 bits (467), Expect = 0.0
Identities = 491/499 (98%)
Strand = Plus / Minus
Query: 4 ggaattctccttgccttaccccaagacagatctcctgggaaaactttctgttttgattta 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaattctccttgcctgagcccaagacagatctcctgggaaaactttctgttttgattta 440
Query: 64 ttctgtagagaaaactatctatttcatttctatttcccaatcaattttctagctctttgg 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttctgtagagaaaactatgtatttcatttctatttcccaatcaattttctagctctttgg 380
Query: 124 ttttttaaccctcagtgatgcccttatataacagcactatttaagtggtccattcaactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttttttaaccctcagtgatgcccttatataacagcactatttaagtggtccattcaactt 320
Query: 184 ttcccaagaaatggactttgagactaaaagaaagttatttgtgaagttctatattcatta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcccaagaaatggactttgagactaaaagaaagttatttgtgaagttctatattcatta 260
Query: 244 ttattattatttgcatgtattcatttggggtgtagggtcatatgttgcactacatatgca 303
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 259 ttattattatttgcatttattcatttggggtgtagggtcgtatgttgcactacatatgca 200
Query: 304 aaggtcagaggacaacttgaaggagttgcttctttccttcttcctgtgcatagaactcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaggtcagaggacaacttgaaggagttgcttctttccttcttcctgtgcatagaactcag 140
Query: 364 ttcatcaagcatgacagcaagtgtctttacccagtgagcaatcttcatggcccaaatggg 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 139 ttcatcaagcatgacagcaagtgtctttacccagtaagcaatcttcatggcccaaatggg 80
Query: 424 agatttttgagctcatttaagttacctgatagaaaaatctccattgcttaatatgaagat 483
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 79 agatttttgagctcatttaagttacctgatagaaaaatctccattgcttaaaattaagat 20
Query: 484 agtctctcttctatattat 502
|||||||||||||||||||
Sbjct: 19 agtctctcttctatattat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no307_e22.g1 MSMg01no307_e22.g1 CHROMAT_FILE:
MSMg01no307_e22.g1 PHD_FILE: MSMg01no307_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:19 2005
(411 letters)
>mm_chr3_7582445_7583257
Length = 813
Score = 768 bits (397), Expect = 0.0
Identities = 409/413 (99%), Gaps = 2/413 (0%)
Strand = Plus / Plus
Query: 1 atcaaagtctcctgaaagggaccttataaaatattcaacttatgttttctgtttgcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaaagtctcctgaaagggaccttataaaatattcaacttatgttttctgtttgcagaa 260
Query: 61 tcctgtttcaattgctacaaaatttacagcttaacggactgtatttttaatttcatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tcctgtttcaattgctacaaaatttacagcttaacggactgtattttgaatttcatttaa 320
Query: 121 tcgataatttaaaagaaaagtcacttaaacttgatcaagtacttgttatgcatctatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgataatttaaaagaaaagtcacttaaacttgatcaagtacttgttatgcatctatcat 380
Query: 181 gtgaaatttagtaatgaagatacatctatgaaaactatatatatttcattatctcaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaaatttagtaatgaagatacatctatgaaaactatatatatttcattatctcaatgt 440
Query: 241 at-at-gtttagtggcaaaaacagatattaatccaatagccacaaataattaccaacttg 298
|| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attattgtttagtggcgaaaacagatattaatccaatagccacaaataattaccaacttg 500
Query: 299 gtaattgtgaaattatgaaagataaatggtattaccctggtagattttgttgtcgttgtt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaattgtgaaattatgaaagataaatggtattaccctggtagattttgttgtcgttgtt 560
Query: 359 gttaacatgacacaaattagttatcttagaaggggaacctcagtaaagaaaat 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttaacatgacacaaattagttatcttagaaggggaacctcagtaaagaaaat 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 813
Length adjustment: 9
Effective length of query: 402
Effective length of database: 804
Effective search space: 323208
Effective search space used: 323208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
