Query= MSMg01no308_b15.b1 MSMg01no308_b15.b1 CHROMAT_FILE:
MSMg01no308_b15.b1 PHD_FILE: MSMg01no308_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:20 2005
(315 letters)
>mm_chr3_38212671_38213385
Length = 715
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Plus
Query: 5 gaattctatgctatcttgtcaggcaaaccttaacacctgactggcaggtatgtgatcatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatgctatcttgtcaggcaaaccttaacacctgactggcaggtatgtgatcatc 264
Query: 65 tcaccatctctgtatctccctgaaaccagccttcagctcctactttcaaatgatactatt 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaccatctctgtatttccctgaaaccagccttcagctcctactttcaaatgatactatt 324
Query: 125 agcaccaacccatcagccttagcaagtaaaaggcattctaaaggccagagatcaacaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcaccaacccatcagccttagcaagtaaaaggcattctaaaggccagagatcaacaaga 384
Query: 185 cccacacagactgtggggagaaggaactactcctgatctcacatcgccagacctcaggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccacacagactgtggggagaaggaactactcctgatctcacatcgccagacctcaggtt 444
Query: 245 ggtccctctccctttctttgtccacatcggtttattcatgaatctatatcttctcctaca 304
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ggtccctctccctttctttgtccacatcggtttaaacatgaatctatatcttctcctaca 504
Query: 305 tctggcagga 314
||||||||||
Sbjct: 505 tctggcagga 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_b15.g1 MSMg01no308_b15.g1 CHROMAT_FILE:
MSMg01no308_b15.g1 PHD_FILE: MSMg01no308_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:20 2005
(290 letters)
>mm_chr3_38377972_38378662
Length = 691
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 cacaggaagcagggcagcaatctacacttgatgaagaaaaaaagtcttagccggagaact 60
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 490 cacaggaagcagggcagcaatctacacttaatgaagaaaaaaagtcttagctggagaact 431
Query: 61 ggttgaggagagactcagtcgtgagctttttcatctacttgacttttgcctctcagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggttgaggagagactcagtcgtgagctttttcatctacttgacttttgcctctcagtttt 371
Query: 121 actttttatctttttccttgtattctactctttgcccttgactaaactgtgcagtactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 actttttatctttttccttgtattctactctttgcccttgactaaactgtgcagtactgc 311
Query: 181 tgcttaaatcttacatgagatgatgtatggctaattttattgcagtgacttttgatcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgcttaaatcttacatgagatgatgtatggctaattttattgcagtgacttttgatcaca 251
Query: 241 tggcaatgcctttcccctcaaacatggcatgct-tgtctcagatgtagtg 289
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 250 tggcaatgcctttcccctcaaacatggcatgctgtgtctcagatgtagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
