Query= MSMg01no309_c16.b1 MSMg01no309_c16.b1 CHROMAT_FILE:
MSMg01no309_c16.b1 PHD_FILE: MSMg01no309_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:40 2005
(319 letters)
>mm_chr3_136481099_136481817
Length = 719
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%)
Strand = Plus / Minus
Query: 5 gaattctctgggattaaatgttcttaaaatgtgattctcgttacctgttgcctttaaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattctctgggattaaatgttcttaaaatgtgattctcgttacctgttgcctttaaagt 460
Query: 65 cctgaaaggggctctacatcacccttccatatttcaggtactttctgagcacatggcccc 124
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cctgaaaggggctcttcattacccttccatatttcaggtactttctgagcacatggcccc 400
Query: 125 tctgtgaatcttaaggagttcagacctatttctgtgaaatcacctagttcaatcatggac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tctgtgaatcttaaggagttcagacctatttctgtgaaatcacctagttcaatcatggac 340
Query: 185 ggggatggtgcgcatgtgcaaatttaatctttaaatcaggacagtaagtcacactagaaa 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggggatggtgcgcatgtgcgaatttaatctttaaatcaggacagtaagtcacactagaaa 280
Query: 245 ttcatttgccttcacattccccagagacatattctagagaattctttaagtcctcctttc 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 279 ttcatttgccttcacattccccagagacatattcaagagaattctttaagtcctcctttc 220
Query: 305 taacaaccacagcca 319
|||||||||||||||
Sbjct: 219 taacaaccacagcca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_c16.g1 MSMg01no309_c16.g1 CHROMAT_FILE:
MSMg01no309_c16.g1 PHD_FILE: MSMg01no309_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:40 2005
(291 letters)
>mm_chr3_136330240_136330929
Length = 690
Score = 526 bits (272), Expect = e-154
Identities = 286/294 (97%), Gaps = 7/294 (2%)
Strand = Plus / Plus
Query: 1 caaacaggaaagctgcttcctagagataattaaacaaaggaaggaaaagtgcattatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 caaacaggaaagctgcttcctagagataattaaacaaaggaaggaaaagtgtattatttt 260
Query: 61 ttgtagtgtatgaaatgttgtcttttatgactttttttttaaa---tctttactttctct 117
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 261 ttgtagtgtatgaaatgttgtcttttatgacttttt----aaaaaatctttactttctct 316
Query: 118 tcataagcaaaggacatttccaaagtcagctcctgaaaactgaacctgtcacagtgaaaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcataagcaaaggacatttccaaagtcagctcctgaaaactgaacctgtcacagtgaaaa 376
Query: 178 tgtgagttccaaatgtaagctaatctttgtcagtttgaatatagtcaagagctgtttggg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtgagttccaaatgtaagctaatctttgtcagtttgaatatagtcaagagctgtttggg 436
Query: 238 aactctaacaggatttaaggagaaaaggaaagggacagctatagcagagagctg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aactctaacaggatttaaggagaaaaggaaagggacagctatagcagagagctg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
