Query= MSMg01no311_c24.b1 MSMg01no311_c24.b1 CHROMAT_FILE:
MSMg01no311_c24.b1 PHD_FILE: MSMg01no311_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:58 2005
(647 letters)
>mm_chr3_44358410_44359457
Length = 1048
Score = 1137 bits (588), Expect = 0.0
Identities = 630/644 (97%), Gaps = 1/644 (0%)
Strand = Plus / Minus
Query: 5 gaattcattctatttatgccaaagctttattttttccaaaactcacataaaggttttcaa 64
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gaattcattctatttagggcaaagctttattttttccaaaactcacataaaggttttcaa 789
Query: 65 aataattatgtctaatcttgtttttgctgtcatttagaatagtagtgtatgtattcttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 788 aataattatgtctaatcttgtttttgctgtcatttagaatagtagtgtatgaattcttta 729
Query: 125 tacatagaatgttaacattagtattgtagacaacaacacattatatgttcatgcatttta 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tacatataatgttaacattagtattgtagacaacaacacattatatgttcatgcatttta 669
Query: 185 taattcttaacagaaattcaacctctctgaagagctataatagcctttattccaaaggct 244
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 668 taattcttaacagaaattcaacctctctgaagatttataatagcctttattccaaaggct 609
Query: 245 tactgcaatgtcatcatggtttagagtttaactctacaaggcacaactgaagaaacaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tactgcaatgtcatcatggtttagagtttaactctacaaggcacaactgaagaaacaaac 549
Query: 305 aaaattcttgtcttgctataatcaggatgctggatttctggaagttcactaccaatggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaaattcttgtcttgctataatcaggatgctggatttctggaagttcactaccaatggaa 489
Query: 365 atctacttttattcttctatgattaaataagttttcgtatgatgttgagaagctgaatgc 424
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 488 atctacttttattcttctatgattaaataagttttcgtatgatgatgagaagctgaatgc 429
Query: 425 atcatagccatgttgccaaccaataatgcagaatctgaatacagtatattgtgacataaa 484
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 428 atcatagccatgttgccaaccagtaatgcagaatctgagtacagtatattgtgacctaaa 369
Query: 485 tgcataaaggcctaaaaaatatcgtattttatagttggtcagaagaaacaaagtaaatcc 544
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 368 tgcataaaggcctaaaaaataccgtattttatagttagtcagaagaaacaaagtaaatcc 309
Query: 545 agagtcaacaatggccatagtgcaggcttgtttatctatgacaattaataatggtattca 604
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agaggcaacaatggccatagtgcaggcttgtttatctatgacaattaataatggtattca 249
Query: 605 gaccacaactctgaactggtattgttctc-aaacaatatgagtt 647
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 248 gaccacaactctgaactggtattgttctcaaaacaatatgagtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_c24.g1 MSMg01no311_c24.g1 CHROMAT_FILE:
MSMg01no311_c24.g1 PHD_FILE: MSMg01no311_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:58 2005
(232 letters)
>mm_chr3_44180771_44181402
Length = 632
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Plus
Query: 1 aaatcacctcatcatgcagaagcatgtggagacaaacagccacagatgtttgcctgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcacctcatcatgcagaagcatgtggagacaaacagccacagatgtttgcctgaagg 260
Query: 61 ttcaagcatatttaaaggcagcttaattataagacactatgaggttcttccaattaattt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ttcaagcatatttaaaggcagcttaattataagacactatgatgttcttccaattaattt 320
Query: 121 gaagctaaatattctatatctgttcattctgttagaaaacctgaagaaatatttacctta 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagctaaatattctacatctgttcattctgttagaaaacctgaagaaatatttacctta 380
Query: 181 catgtgattatggtttggtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgt 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtgattatggtttggtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgt 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
