XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCAGGTTTACAAAGAAGTTTGTATCATTCTGTTTCTTCTCAGCCATCCTC
TGGGCCTGTTTCATTCCCTTCGACATGCCAGAAAGTACTGGAAGACACCA
TACTGAGCATGCACTGGGAGGCCTGATGTCTTATCTGCCTGATCTCATCC
TCTTGTCCTTGGACATAAGTTTTCCAACAGGCTTAGTAGCTTGCTTTTTT
ACAAGCACATGTCCTTTAGCAAGCCAGATGGCTTTTCTTGCACGAAAATA
TCCTTGCCTGTGATGATCAAGTTGGAGAAGCAGCTGAGGAAGAGGCTCAT
GAAAACATATCACTAAGTTTAACAACACCGCATTTAGAAATGGCAGAGCC
ATCACTTTTCTCATCTCATCTTCAGTCCTTGACAGAAACTTGGTGTGAAC
TTTGATGACTGTGGCAGTAAATGAACAGAATAGTCTTCTCCGGGTTTGCT
CCTTGTCTGTGTTGCACACATGTATACTGCTTTTTATACAACATGGTATT
TGTGTACATGACTAAGAAGATTAAATTAACCTGTAGTGGAGAAAGATCAT
TAAACTGAAGTACTTCTGACAAGTAATGTCATCTCCCTTAGCTCCCTGCT
AGGGATGTGTATGGAATCACTTGTTAGAAAAAGTATCTGCCTTATGTCAT
TAACTACTCAATAAGATATTTTTTGGCATACTATACTCATGTCATTTTGN

CTGTGGGAGGCCTGGCGGCCGCCTGTTTCCGACCTGGGGTGACCTATAGA
AGTAACACAACAATCCTGAGTGTGAACAAGTGGGTCTCTGCATCCACATA
TGTTTTATGTAGCATTCTTTGGCTCTTTTACTTATGTTTGTTTGTCTTGT
CCTATTCTGATGTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTCTTACTAT
ACATTATTTTATTACTATCCTAGAGAAACCTGTTTGTTTTCTATTGAGAG
ACAAACATGGGTCTGAATGGAAAGTGAGTGGGGGAGGAACTGGAAGTAGA
GAGAGATTACGTGAATTAGGACATCATGTGAGAAAAAAAAACAACCTATT
TTCTTTATTCCCCCCCCCATACCGAATAATAATTTAATATATAATAGTGA
TTTTTAACCCATTAATTATTTGCTAAGAGGCTGTCTTTCTGCTACATATT
ATAAAAGGTAATGCATTTGAATGTAAAAGTCCCTTAGACAATCATGATAT
TCCAATTATGGATTGGAAATAATGTGATATTGGAATAAAAATGCCAGAAA
TGGACTGTATATACAATAAAACTTTAATGCAGATACTTTTTCAGAGTGAA
TGTACTCTGTCGTGGTGATGGCAAAAAGAACTTTACATAACTTGTTTTTG
TATTTTCCTATAAGAAAACTGGTCTATATTAATGCTACCTATTAATAGAC
CCAGCTGCATCCTAGTTTGCGGCAAGATTTATTTATCATGATTTA

Query= MSMg01no312_o15.b1 MSMg01no312_o15.b1 CHROMAT_FILE:
MSMg01no312_o15.b1 PHD_FILE: MSMg01no312_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:06 2005
         (631 letters)



>mm_chr3_124059961_124060992
          Length = 1032

 Score = 1189 bits (615), Expect = 0.0
 Identities = 627/631 (99%), Gaps = 1/631 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgacatgccagaaagtactggaagacaccatactgagcatgcactgggaggcctgatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tcgacatgccagaaagtactggaagacaccatactgagcatgcactgggaggcctgatgt 772

                                                                       
Query: 61  cttatctgcctgatctcatcctcttgtccttggacataagttttccaacaggcttagtag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 cttatctgcctgatctcatcctcttgtccttggacataagttttccaacaggcttagtag 712

                                                                       
Query: 121 cttgcttttttacaagcacatgtcctttagcaagccagatggcttttcttgcacgaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cttgcttttttacaagcacatgtcctttagcaagccagatggcttttcttgcacgaaaat 652

                                                                       
Query: 181 atccttgcctgtgatgatcaagttggagaagcagctgaggaagaggctcatgaaaacata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atccttgcctgtgatgatcaagttggagaagcagctgaggaagaggctcatgaaaacata 592

                                                                       
Query: 241 tcactaagtttaacaacaccgcatttagaaatggcagagccatcacttttctcatctcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcactaagtttaacaacaccgcatttagaaatggcagagccatcacttttctcatctcat 532

                                                                       
Query: 301 cttcagtccttgacagaaacttggtgtgaactttgatgactgtggcagtaaatgaacaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cttcagtccttgacagaaacttggtgtgaactttgatgactgtggcagtaaatgaacaga 472

                                                                       
Query: 361 atagtcttctccgggtttgctccttgtctgtgttgcacacatgtatactgctttttatac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atagtcttctccgggtttgctccttgtctgtgttgcacacatgtatactgctttttatac 412

                                                                       
Query: 421 aacatggtatttgtgtacatgactaagaagattaaattaacctgtagtggagaaagatca 480
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 411 aacatggtatttgtgtacatgactaaaaagattaaattaacctgtagtggagaaagatca 352

                                                                       
Query: 481 ttaaactgaagtacttctgacaagtaatgtcatctcccttagctccctgctagggatgtg 540
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttaacctgaagtacttctgacaagtaatgtcatctcccttagctccctgctagggatgtg 292

                                                                       
Query: 541 tatggaatcacttgttagaaaaagtatctgccttatgtcattaactactcaataagatat 600
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 291 tatggaatcacttgttagaaaaagtatctgccttatgtcattaattactcaataagatat 232

                                          
Query: 601 ttttt-ggcatactatactcatgtcattttg 630
           ||||| |||||||||||||||||||||||||
Sbjct: 231 ttttttggcatactatactcatgtcattttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space:   634662
Effective search space used:   634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)