Query= MSMg01no313_b10.b1 MSMg01no313_b10.b1 CHROMAT_FILE:
MSMg01no313_b10.b1 PHD_FILE: MSMg01no313_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:23 2005
(199 letters)
>mm_chr3_116327828_116328426
Length = 599
Score = 331 bits (171), Expect = 2e-95
Identities = 189/195 (96%)
Strand = Plus / Plus
Query: 2 atggctgctttaaagcattttcctgcactgtgatgtttgttatcctatggtggtatcgtt 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 202 atggctgctttaaagcattttcctgcactgtgatgtttgttatcctatggtgttatcatt 261
Query: 62 tgtgttctttattcagtaaatttgcttaaattttctgggttttttgttatgtagttgtac 121
|||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 262 tgtgttctttattcagtaaatttgcttagattttctgggctttttgttaagtagttgtac 321
Query: 122 tggctagttttgtgtcaacttgacacagctggagttatcacagaaaaaggcgcttcagtt 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 322 tggctagttttgtgtcaacttgacacagctggagttatcacagagaaaggcgcttcagtt 381
Query: 182 aaggaaatgcctcca 196
|||||||||||||||
Sbjct: 382 aaggaaatgcctcca 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no313_b10.g1 MSMg01no313_b10.g1 CHROMAT_FILE:
MSMg01no313_b10.g1 PHD_FILE: MSMg01no313_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:23 2005
(370 letters)
>mm_chr3_116508616_116509387
Length = 772
Score = 640 bits (331), Expect = 0.0
Identities = 361/377 (95%), Gaps = 12/377 (3%)
Strand = Plus / Minus
Query: 1 agtgaacattgataaacatcttgaagaa-tttttttctttaatacttttta------ccc 53
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 572 agtgaacattgataaacatcttgaagaattttttttctttaatactttttaaaagtg--- 516
Query: 54 ccagatttttgaaaagccatctactgtgtggccttgatgctgaacggcccttgtcttcca 113
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 --agatttttggaaagccatctactgtgtggccttgatgctgaacggcccttgtcttcca 458
Query: 114 ggtttgctcggggttttgggtcactgagctctggctccagcttggctctcctgactctgc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggtttgctcggggttttgggtcactgagctctggctccagcttggctctcctgactctgc 398
Query: 174 ccttccctggggttggtttgtccttctcttctgtcttcagtattcctctcactctggcat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccttccctggggttggtttgtccttctcttctgtcttcagtattcctctcactctggcat 338
Query: 234 ctctcctcaggctctctgtcttcctcatttcaggtcattgccagcgtgtgcctggttccc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctctcctcaggctctctgtcttcctcatttcaggtcattgccagcgtgtgcctggttccc 278
Query: 294 ttcttgctctgttcatctaccatagaatctttgcattcccatggctgggctctagcctca 353
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 277 ttcttgctctgttcatctaccatagaaaccatgcattcccatggctgggctctagcctca 218
Query: 354 atgctgaggactctgaa 370
|||||||||||||||||
Sbjct: 217 atgctgaggactctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 772
Length adjustment: 9
Effective length of query: 361
Effective length of database: 763
Effective search space: 275443
Effective search space used: 275443
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
