Query= MSMg01no315_c24.b1 MSMg01no315_c24.b1 CHROMAT_FILE:
MSMg01no315_c24.b1 PHD_FILE: MSMg01no315_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:35 2005
(654 letters)
>mm_chr3_137007333_137008385
Length = 1053
Score = 1210 bits (626), Expect = 0.0
Identities = 647/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 1 caattttataaaacaaaaaattgattgaacacactataagaagacaccgtgctcacatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 caattttataaaacaaaaaattgattgaacacactataagaagacaccgtgct-acatcc 259
Query: 61 agtgactttatggaaactaataggagccattccccaggttagatacagtgagaagagaca 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 agtgactttatggaaactaataggagccattccccaggttagatagagtgagaagagaca 319
Query: 121 aaagcaggtaacatgaattctgctgtgttataaatcttaaggaataagtaaagagcagta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaagcaggtaacatgaattctgctgtgttataaatcttaaggaataagtaaagagcagta 379
Query: 181 taaaaaattcactagttgcttaatctggtatgttgggaaaataagaatgtgacaaacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaaaaattcactagttgcttaatctggtatgttgggaaaataagaatgtgacaaacatt 439
Query: 241 acaacttgaaatcaggaggttcaaggtgaatatagaatgtttcaaaataggggcattgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acaacttgaaatcaggaggttcaaggtgaatatagaatgtttcaaaataggggcattgta 499
Query: 301 aaaacatcagtgtattctagtctagaaatagaaggtagccatattttgaacacgcctgcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 500 aaaacatcagtgtattctagtctagaaatagaaggtagccatattttgaacatggctgcc 559
Query: 361 tactagaaagcagagtgcaaagaatagtatcaggagatgttaaatggcaacatgagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tactagaaagcagagtgcaaagaatagtatcaggagatgttaaatggcaacatgagaaaa 619
Query: 421 agagatgactatccctggaggtagctcaggatgaggcagattccaaacttgtataaagct 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 agagatgactatccctggaggtagctcaagatgaggcagattccaaacttgtataaagct 679
Query: 481 ctgggttcaagtcccacgcttccaaataaataggaaagaaatattgactcttatagttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgggttcaagtcccacgcttccaaataaataggaaagaaatattgactcttatagttga 739
Query: 541 caattaagacctgtagcagttgcttgagatggggttttatcatcctagttataaaccagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caattaagacctgtagcagttgcttgagatggggttttatcatcctagttataaaccagg 799
Query: 601 aggatcaatatgtcagcagaatatagattaaactattggggtcaggagagataa 654
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 800 aggatcaatatgtcagcagaatattgattaaactattggggtcaggagagataa 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1053
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1043
Effective search space: 671692
Effective search space used: 671692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_c24.g1 MSMg01no315_c24.g1 CHROMAT_FILE:
MSMg01no315_c24.g1 PHD_FILE: MSMg01no315_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:35 2005
(638 letters)
>mm_chr3_137183599_137184635
Length = 1037
Score = 1145 bits (592), Expect = 0.0
Identities = 626/638 (98%), Gaps = 3/638 (0%)
Strand = Plus / Minus
Query: 1 ttgtttcattttgtgttgttttgacatattgtgtgtgtgtgtgtatcatggtttcttcat 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 993 ttgtttcattttgtgttgttttgacatat--tgtgtgtgtgtgtatcatggtttcttcat 936
Query: 61 tttcatatttgtgttcttgtgaggcttttgtgaaagggaaggagagagcaagtgagagaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 935 tttcatatttgtgttcttgtgaggcttttatgaaagggaaggagagagcaagtgagagaa 876
Query: 121 agagagaaagagagagagaggagagagggagagagaagagcacatagagttgggcggata 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 875 agagagaaagagagagagaggagagagggagagagaaaagcacatagagttgggtggata 816
Query: 181 gggaaatggggagaatttttgaggagggttgaaagcagagaaacgtgattaaaacatatg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 815 gggaaatggggagaatttttgaggagggttgaaagaagagaaacgtgattaaaacatatg 756
Query: 241 aaaaattaaattaaaaaggaaggcagatattttaaaaatctatttcatatattggggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aaaaattaaattaaaaaggaaggcagatattttaaaaatctatttcatatattggggcat 696
Query: 301 tccaagaaaccttaaagaatgattgcctctgcttttctggggacacaagacgcaccccaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 695 tccaagaaaccttaaagaatgattgcctctgcttttctggggacacaagatg-aatccaa 637
Query: 361 tgtcctttggtcagtaattctgtatagtttgtgtagttatttctttccaccattgtattt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cgtcctttggtcagtaattctgtatagtttgtgtagttatttctttccaccattgtattt 577
Query: 421 atatctattttactttttcaattgggaattttaaaacttgcagttaaataatcatccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atatctattttactttttcaattgggaattttaaaacttgcagttaaataatcatccctt 517
Query: 481 ctaatggacgaaccagttcttttctcgtcccagacctgtggctatgctgcagagaggcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctaatggacgaaccagttcttttctcgtcccagacctgtggctatgctgcagagaggcga 457
Query: 541 gttattaaaatttagggacttcatgtccatggagcatattttgagcaatgtttttttcta 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 456 gttattaaaatttagggacttcatatccatggagcatattttgagcaatgtttttttcta 397
Query: 601 aattgtttttaattttaaatatccctgaaactgaaggc 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aattgtttttaattttaaatatccctgaaactgaaggc 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space: 644956
Effective search space used: 644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
