TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CATTTAATTCCACTTTCCAATTCTGGATCCCATGAAGTTGCTTGGTGTTG
CAGGTCTTCACTCACCCTCTCTCTGAATCACCTTTCTCCTTGAACAGATA
GGGTAGTGAGAATCTCATGAAGCAGTCTTGTGAGCTTTATCAAGACATGT
ACAAATGTGGAGGAAAAACAATTGGTGAATACACTGTACACTATCATTCA
CTAACTGAACAGAGGAACTCCTGGGAAGTGCCAAATGGTATAGGATTTAG
AATTTTCAGGGTTTTTCTTTTTCTTAAAACTGTTATCTGTGGCTTAAATT
GCTTTCAAAAGTATTTTTATTAGATTTTATTTTTGCTTAAACTTACAAAA
CAATGGATTTGCGCCACATTTTCATAAATGTATATCATTGTATATGCTCT
AGCTTGCTTTTTCATTGCTGTGATAAAACACTGAACAAAAGCAACTTGGC
AAAGCAAAGGTTTATTTCATCTTATAGACTATGGTCCTGTTTTTGAGGGA
AGTCATTGTGTCCTGAAAGCAAAGACCATGGAGGGATGCTTCTTATTGGC
TTGGTCTCTTTTTTTGCTTAGATCTTCCTAACTTAGGCCAGGCTCACCTG
CCTAGGGATGACACTGCTCACAGTGGGCTCACCCCTCCTCTATTCATCAT
AAAGCAAAAAAGTGTCTCACAAACCAATCTGATGGAGTCACTTCCTCA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCTAGGTATTCGTCTGTTGAGAGGG
GTTGCCCATTTATTTTCAGCTCAAGACAGAAGTCTCTCGGGGTCCATACA
AAGTCTGGGAAGAAGCTCACATATTCATCTGAGTCCTCCAAAGCTTGATG
GTCAGGGGAGCATCTTGTTCTGATTCTGTCAGTCAGCTCTGTCACATAGC
TGATCAGCTAATTAAGGAAAGCCACTGAAACAACTGTAGCACTATCCAAA
GCTCCAGATTTCCCAGGCCGCAATAATTCCACATCTTCCCAAACCTAAAC
CAAAAGTTTCATCTGCCTCACCCCTAACTTCAGTGTGAACACTGCCTGCT
ACATATATGTGACTTACCATCATCTCATGTTGCATTAAGAAAAAGCTGGA
GTCATGAAGGTTGGAATGAACTATAGAAAGGATACTGCAGCTGGTCCATG
GCCTGCTGGTTGATGGCCCCAATGCTGTTGTAGACAAAGGTGCTGCTTAG
AAGTATAGCCAGGGCAAAGATCCAGCAGTCGTTCTGGTTGTCACCCTGGA
AGTCAGAGCACATGTATAGGTTGAGAGTATGTCTTGTTCTTATGTCACTT
TCCAAATTAGCAGTAGTAAAGAACACATACTCATTAAAGGGCATATTAGC
CTTACAAATGAAAGCTTTGTAACCTACGCAAGGGTATAAGCCGAAACACA
GAAGCAATA

Query= MSMg01no315_e06.b1 MSMg01no315_e06.b1 CHROMAT_FILE:
MSMg01no315_e06.b1 PHD_FILE: MSMg01no315_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:41 2005
         (660 letters)



>mm_chr3_142241424_142242483
          Length = 1060

 Score = 1207 bits (624), Expect = 0.0
 Identities = 651/660 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccaattctggatcccatgaagttgcttggtgttgcaggtcttcactcaccctctctct 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccaattatggatcccatgaagttgcttggtgttgcaggtcttcactcaccctctctct 260

                                                                       
Query: 61  gaatcacctttctccttgaacagatagggtagtgagaatctcatgaagcagtcttgtgag 120
           ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gaatcacctttctccttaaacagatagggtagtgagtatctcatgaagcagtcttgtgag 320

                                                                       
Query: 121 ctttatcaagacatgtacaaatgtggaggaaaaacaattggtgaatacactgtacactat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttatcaagacatgtacaaatgtggaggaaaaacaattggtgaatacactgtacactat 380

                                                                       
Query: 181 cattcactaactgaacagaggaactcctgggaagtgccaaatggtataggatttagaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcactaactgaacagaggaactcctgggaagtgccaaatggtataggatttagaatt 440

                                                                       
Query: 241 ttcagggtttttctttttcttaaaactgttatctgtggcttaaattgctttcaaaagtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ttcagggtttttctttttcttaaaactgttatctgtggcttaaattgctttcaaaggtat 500

                                                                       
Query: 301 ttttattagattttatttttgcttaaacttacaaaacaatggatttgcgccacattttca 360
           ||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 501 ttttattagtttttttttttgcttaaacttacaaaacaatggatttgtgcaacattttca 560

                                                                       
Query: 361 taaatgtatatcattgtatatgctctagcttgctttttcattgctgtgataaaacactga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatgtatatcattgtatatgctctagcttgctttttcattgctgtgataaaacactga 620

                                                                       
Query: 421 acaaaagcaacttggcaaagcaaaggtttatttcatcttatagactatggtcctgttttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaaaagcaacttggcaaagcaaaggtttatttcatcttatagactatggtcctgttttt 680

                                                                       
Query: 481 gagggaagtcattgtgtcctgaaagcaaagaccatggagggatgcttcttattggcttgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagggaagtcattgtgtcctgaaagcaaagaccatggagggatgcttcttattggcttgg 740

                                                                       
Query: 541 tctctttttttgcttagatcttcctaacttaggccaggctcacctgcctagggatgacac 600
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 tctctttttttgcttagatcttcctaacataggccaggctcacctgcctagggatgacac 800

                                                                       
Query: 601 tgctcacagtgggctcacccctcctctattcatcataaagcaaaaaagtgtctcacaaac 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgctcacagtgggctcacccctcctctattcatcataaagcaaaaaagtgtctcacaaac 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no315_e06.g1 MSMg01no315_e06.g1 CHROMAT_FILE:
MSMg01no315_e06.g1 PHD_FILE: MSMg01no315_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:41 2005
         (592 letters)



>mm_chr3_142322794_142323785
          Length = 992

 Score = 1052 bits (544), Expect = 0.0
 Identities = 580/592 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctaggtattcgtctgttgagaggggttgcccatttattttcagctcaagacagaagtct 60
           |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 792 cctaggtattcgtctgctgagaggggttgtccatttgttttcagctcaagacagaagtct 733

                                                                       
Query: 61  ctcggggtccatacaaagtctgggaagaagctcacatattcatctgagtcctccaaagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ctcggggtccatacaaagtctgggaagaagctcacatattcatctgagtcctccaaagct 673

                                                                       
Query: 121 tgatggtcaggggagcatcttgttctgattctgtcagtcagctctgtcacatagctgatc 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgatggtcaggggagcgtcttgttctgattctgtcagtcagctctgtcacatagctgatc 613

                                                                       
Query: 181 agctaattaaggaaagccactgaaacaactgtagcactatccaaagctccagatttccca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agctaattaaggaaagccactgaaacaactgtagcactatccaaagctccagatttccca 553

                                                                       
Query: 241 ggccgcaataattccacatcttcccaaacctaaaccaaaagtttcatctgcctcacccct 300
           |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 552 ggccacaataattccacatcttcccaaccctaaaccaaaagcttcatctgcctcatccct 493

                                                                       
Query: 301 aacttcagtgtgaacactgcctgctacatatatgtgacttaccatcatctcatgttgcat 360
           |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 492 aacttcagtgtgaacactgcctgctacatatacgtgacttaccatcatttcatgttgcat 433

                                                                       
Query: 361 taagaaaaagctggagtcatgaaggttggaatgaactatagaaaggatactgcagctggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taagaaaaagctggagtcatgaaggttggaatgaactatagaaaggatactgcagctggt 373

                                                                       
Query: 421 ccatggcctgctggttgatggccccaatgctgttgtagacaaaggtgctgcttagaagta 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 372 ccatggcctgctggttgatggccccgatgctgttgtagacaaaggtgctgcttagaagta 313

                                                                       
Query: 481 tagccagggcaaagatccagcagtcgttctggttgtcaccctggaagtcagagcacatgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tagccagggcaaagatccagcagtcgttctggttgtcaccctggaagtcagagcacatgt 253

                                                               
Query: 541 ataggttgagagtatgtcttgttcttatgtcactttccaaattagcagtagt 592
           |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 252 ataggttgagagtatgtcttgttcttatgtcactttccaaatgagcagtagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space:   571524
Effective search space used:   571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)