XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAACCGCGGAATTCAT
TCTGGTTTCCCTTTATGTTCAGTGAGGAAGAACACCAAATAGTAGATTCA
ATTTAGTAAAAGCAATGAAAAACGTCCTATTCTCAATAGTAATTTCCTGT
CCACTCTTTACATTACATGATCTGTTCTTAAAATGCTTCACTTTTTAATT
CTATTCCAGACATGATTGCCCTTCATTGCTCTACTGCAGGCTGTGAGAAT
CTCTTCTGAGTTTAAAACTACTGATTACTTATTTTGTATCTACATTGCAA
GAATTATTCTGTGATCCTATATTATTTCATATATATATGGAATTTTTATT
ATAAAACAAGGACCAGATATTTGTTTTCTTACAATTATTTATTATGATGA
GCTGAAATATTTCACCCCACCCAGAGTTTGTCCATGATGTGGGATATTTC
AGTGGTCAGACAGTGTTTTATAGATTAAGCATTTTTTACACCTATCTCAG
GTTCTCTTCAACTTAGGTCTGACTCAGTGGATCAGAGTAAGACCTGAGAA
TGGCAATTTCTGTGTAGTTTTGATGTGATGCCCTTCCAGTCCCCATAGTG
CATTTCTTGTCTCACAGTAAACTGAATCTTATTTCTTGTCTCACAGTAAA
CTGAATCTTAGTCTCAATGGTCCTGTAAAATTTAGTTCAGACCCATGGAA
AATTTTATATATATATATAAAATGAAAAACAGN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATCAATGCAAGTTGCTATTCATGTGCTAT
GTTCTAGCTTTCTATTTCTGAGATCACAATATGGTGTTTTGGGTAGGAGG
GAGTTTACTTGGCTTACATTTCTACTCTACTTGAAGGAACTCAGGGAAGG
AATTCAAGCAGGAATACAGAGGCAGGAACAGAAACAAAGACTGCCGAGGA
GAGTGCTGCCTACTGGCTAGTCTTTTTTTATGAAACTCAAGACCACCTGC
TCAAATGTGGCACCACCCACAGTAGGCTGAGCCCCTTACCTACAATCAAC
AATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA
TCCATCCATCCATGCATCCATCCACCCATCCATCTATCCATCCATCCATC
CATCTATCCATCCATCAATCAATCAAAAAATTCTCCATAGACTTGCCTAC
AGGTCAGTCTAATGGATACATTTTTTTTCAACTGAAGTTTTCTCTTTCTA
GGTAACTCTAGTCTGCATCAAGTCTCAGACTAACCAGCACATGGCAGGTC
CTTTTGTAACTGAGTTCTCTTTCTATTACCTAACATATTTATTTTGAACT
GTAGCTTAGTCCTAGTTTAGAAGTTAACTTGAACACAAAAGGAGGGGGAA
ATTTATTATCCCCAAATAATAGTTGTGCCTTTGAGCAT

Query= MSMg01no315_l22.b1 MSMg01no315_l22.b1 CHROMAT_FILE:
MSMg01no315_l22.b1 PHD_FILE: MSMg01no315_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:19 2005
         (621 letters)



>mm_chr3_75050491_75051514
          Length = 1024

 Score = 1093 bits (565), Expect = 0.0
 Identities = 608/623 (97%), Gaps = 3/623 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaattcattctggtttccc-tttatgttcagtgaggaagaacaccaaatagtagattcaa 60
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcattctggtttcacatttatgttcagtgaggaagaacaccaaatagtagattcaa 261

                                                                       
Query: 61  tttagtaaaagcaatgaaaaacgtcctattctcaatagtaatttcctgtccactctttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttagtaaaagcaatgaaaaacgtcctattctcaatagtaatttcctgtccactctttac 321

                                                                       
Query: 121 attacatgatctgttcttaaaatgcttcactttttaattctattccagacatgattgccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attacatgatctgttcttaaaatgcttcactttttaattctattccagacatgattgccc 381

                                                                       
Query: 181 ttcattgctctactgcaggctgtgagaatctcttctgagtttaaaactactgattactta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttcattgctctactgcaggctgtgagaatctcttctgagtttaaaactactgattactta 441

                                                                       
Query: 241 ttttgtatctacattgcaagaattattctgtgatcctatattatttcatatatatat--g 298
           |||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||  |
Sbjct: 442 ttttgtatctacattgcaagaattattctgtgatcctagaggatttaatatatatatatg 501

                                                                       
Query: 299 gaatttttattataaaacaaggaccagatatttgttttcttacaattatttattatgatg 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaatttttattataaaacaaggaccagatatttgttttcttacaattatttattatgatg 561

                                                                       
Query: 359 agctgaaatatttcaccccacccagagtttgtccatgatgtgggatatttcagtggtcag 418
           ||||||||||||||| |  |   |||||||||||||||||||||||||||||||||||||
Sbjct: 562 agctgaaatatttcagcttatgtagagtttgtccatgatgtgggatatttcagtggtcag 621

                                                                       
Query: 419 acagtgttttatagattaagcattttttacacctatctcaggttctcttcaacttaggtc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 622 acagtgttttatagattaagcattttttacacctatctcaggttctcttcaacttagttc 681

                                                                       
Query: 479 tgactcagtggatcagagtaagacctgagaatggcaatttctgtgtagttttgatgtgat 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgactcagtggatcagagtaagacctgagaatggcaatttctgtgtagttttgatgtgat 741

                                                                       
Query: 539 gcccttccagtccccatagtgcatttcttgtctcacagtaaactgaatcttatttcttgt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gcccttccagtccccatagtgcatttcttgtctcacagtaaactgaatcttatttcttgt 801

                                  
Query: 599 ctcacagtaaactgaatcttagt 621
           |||||||||||||||||||||||
Sbjct: 802 ctcacagtaaactgaatcttagt 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1024
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1014
Effective search space:   619554
Effective search space used:   619554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)