CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCACCTCAACTTTCCCAGTTCCCTCTGCCTCTGCTCCCTGAGTGCTGG
AATTAAAAGCCTGCCCCACCACATCCAACCCTTTAGCAAGCACTCCAGTT
CTCCTTCCCAGAATTCTCACAGCCCACTGTGAGCTCAGGTGGCTCTGCCC
ACTTTTCTGAGTCCGGTTTTTACTCATTTTTTCTGCCTCTTCCTTTAGCT
GCAGAGATAAGCGTGCTTTTGCCCACATTCTGGCCTCCCCTCCTCCTCGA
GAGCCCAGTCCCCACTAGGCACTGCCCAAGGCCCTGTGGCTGTCCTCCAT
GCTGACTCAACATGGTTTCTGTTTGTTTTTTAATCCCTCTTATCTCTATT
CTTTCTCTAGGCAGCTGCCGAGGTTTATAGCTTGCCTGTCCTGGGGTCCT
TTTAAATTCTAATGAAATTGTCCCCAAGTTTCCATGGGAGTCTGTTTTTA
AATGATCTTAATAATGAGACATGGAACACAAGAGAGGACCTTGATTGCCT
GGGTATCAGTGCTGGTGCTGAAAGCCCTCACCACTGAGCCATCTCTGCAG
CCTGCTTCTGTAGCTCTGAAAGCCTTTGTCTTCTCATGACTGATTCTCCA
GGGCTGTGTCTTTTGCCGCTCTCTGTACCACTGCACACGTAATCAGCATG
TGTGGCACTGAGCAGGCTCCTACCAN

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTCTCCCTGGATATGGAAGACCGA
GGACCTCAGCTTCTTGCTGACTGTATCTCATGAGTGCTCCATCACTCCTG
GAGTTCTTTTTTCCAGGCCCTACCTCCTACAGTTGTTCATTATGTGGGTC
TCCTCAGCATGGCCTCTGCNTTTATCAAACAAACAAGGAGAATCTTGGGG
CCACCAGTTGCGTAGGGCTATCTTCCATGGGCAGAAATGGACTNNAATGC
CTTANTCTTGGTCAGAAACAAGATTATTGTGTTCCACCCAGTCTTGAGAC
TGNNNNNNNNNNNACAAGGNNTGGACGGGNNTGNAAGGTATGAAGGATCA
CCGGGNNNTTCTGGGNNNNNNNCTGGGNNAACCACNAAAAGGAAACAGGA
AAAAAAAAAGGGGTTTGCCGCATAAAGGGAAGGGTCCCGTCCGTGAAGCT
GGAGCCCTCGNNGNAAAAAAGGGNGGGGCCTTTGGGAAGGTTCTGGGAAA
GGAGGACTGGTTTGTGGTATCGATNNNNNANNNNNNNTNCAATTATTATA
TTCCTCCTTATTATTTTTNNNTTTNTATNNTTTTTTTTTTNCCCCTTCCT
TCCCCGTTCTCCCCCCCCNNNNACGANNNNNNCACGCNNNNNNNNNNNNN
NNNCCTNNNTCGGTCNNTNNAAAAAAGCCATTTTTCGCCGTCCCGCCCTA
GANNTGCCANAANTTAACNCACCANNNCCTGGNNNN

Query= MSMg01no317_c22.b1 MSMg01no317_c22.b1 CHROMAT_FILE:
MSMg01no317_c22.b1 PHD_FILE: MSMg01no317_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:09 2005
         (681 letters)



>mm_chr3_9448983_9450064
          Length = 1082

 Score = 1176 bits (608), Expect = 0.0
 Identities = 659/680 (96%), Gaps = 9/680 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattcacctcaactttcccagttccctctgcctctgctccctgagtgctggaattaaa 62
           |||||||||||||||  ||  ||||||||||||      |||||||||||||||||||||
Sbjct: 209 ggaattcacctcaacaatcagagttccctctgc------tccctgagtgctggaattaaa 262

                                                                       
Query: 63  agcctgccccaccacatccaaccctttagcaagcactccagttctccttcccagaattct 122
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcctgccccaccacatccaaccttttagcaagcactccagttctccttcccagaattct 322

                                                                       
Query: 123 cacagcccactgtgagctcaggtggctctgcccacttttctgagtccggtttttactcat 182
           |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 323 cacagcccactgagagctcaggtggctctgcccacttttctgagtccggcttttactc-t 381

                                                                       
Query: 183 tttttctgcctcttcctttagctgcagagataagcgtgcttttgcccacattctggcctc 242
           ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 382 tttttctgcctcttcctttagctgcagagataagcatgcttttgcccacactcgggcctc 441

                                                                       
Query: 243 ccctcctcctcgagagcccagtccccactaggcactgcccaaggccctgtggctgtcctc 302
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 442 ccctcctcctcgagagcccagtccccactaggcactgcctaaggccctgtggctgtcctc 501

                                                                       
Query: 303 catgctgactcaacatggtttctgtttgttttttaatccctcttatctctattctttctc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 catgctgactcaacatggtttctgtttgttttttaatccctcttatctctattctttctc 561

                                                                       
Query: 363 taggcagctgccgaggtttatagcttgcctgtcctggggtccttttaaattctaatgaaa 422
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taggcagctgctgaggtttatagcttgcctgtcctggggtccttttaaattctaatgaaa 621

                                                                       
Query: 423 ttgtccccaagtttccatgggagtctgtttttaaatgatcttaataatgagacatggaac 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgtccccaagtttccatgggagtctgtttttaaatgatcttaataatgagacatggaac 681

                                                                       
Query: 483 acaagagaggaccttgattgcctgggtatcagtgctggtgctgaaagccctcaccactga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acaagagaggaccttgattgcctgggtatcagtgctggtgctgaaagccctcaccactga 741

                                                                       
Query: 543 gccatctctgcagcctgcttctgtagctctgaaagcct--ttgtcttctcatgactgatt 600
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 742 gccatctctgcagcctgcttctgtagctctgaaagcctctttgtcttctcatgactgatt 801

                                                                       
Query: 601 ctccagggctgtgtcttttgccgctctctgtaccactgcacacgtaatcagcatgtgtgg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctccagggctgtgtcttttgccgctctctgtaccactgcacacgtaatcagcatgtgtgg 861

                               
Query: 661 cactgagcaggctcctacca 680
           ||||||||||||||||||||
Sbjct: 862 cactgagcaggctcctacca 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1082
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1072
Effective search space:   719312
Effective search space used:   719312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)