TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CACATACTTATACGTATATTTTAGAAGTATGTATATTGTATGTGTAAAAG
GAATCTCAAAAAAATAAAATCCGTAAGAGCTGTCTGAAAAGCGGTGGTGG
GACGGCAGCAAGGGAAGCGAAGAGGCTCCTTCCCTGTGACCACTCATTCA
CACTTTATAATTCAAATGTCATCATCTCAGCTACGTGAAGAATAATGCTG
CATAGTGTCCTAAGGTGAGGACAAACATCAAGTGTACCCATGTTTGTCCC
TAGAGAAAAGAGGAGGAGCAACGAATGGGTTTCAGGAAAGTGGAAATTAC
ATATACCTAGGATGTGTTCATTCCCTCACCCCCACAATATAACAAATATT
AATAATTATTAATGACGCGCACACGAGCAGCATAATAGTCAGTGTACAAT
TTTAAAATTAAATTAAATTTTGCTCAAATCAAAAACCTTGAAATAAAGAC
TACCTCATAGAGTCTACCACATACTCATCCTGATTGCTAGCATTAAAACA
AAGACATCACTGACCCTCGGGCAGCCCCTGGCAATGTTAATGCAAGGTGA
GCAAAAGGATCGGTCAGTGAGCTTCTTTTAAATCCACTGAGTATCACCTC
GGGAGGCTGAGGTGTATTCGTGGATGTTAGCTTAAGAAAAATGAGCGTCT
GTTCACGGAGAGAGTTGTACAACATATTCACAGCACTTTTATTAATGAG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTCATCTGCTTACAAGTTTGTTTCAG
CTTTGAAGGGAGAGATCACAGCCATTATTCATTTTTCATTTGTAGCATTA
AGCATCGGTACCCCTCACGCCAAATTTAACATCTAAATTAGATACAGGAG
TGAATAATAAATGAGTTAATGAGATAAAGAGTTGTGGTAAGTTTCCTGAA
GGACAGGGAACTTTGCAGCGCCAAAGCTCATTTTCAGGAACTGTTGGTGA
CGAGCAGGCAATCCCTGGGAAATATCTGTTTATGGCCCCACCTGAGTACA
CTTTGGGACTCTTCTTTTAAGTCTCCGACCCTTTGTCCACCAGATCTCCA
GTCTCTGTTACAAGATCCCCACCTACTGGAAGGATCTGACTCGTATCTTT
CTCAGAGGATATTTCTATCTTGGGCCATCAGTGCCAGGATACAGGCCTCT
ATGTCATTCTCCTTCATGACTTGGAACATCAGCTCCTTCCTTTTCCTGCA
GCTGAGGTCACTGCTAGCAGTGGCTGACACTCAATCAACAAGGTGAACCC
TCGATTGACAGATTGATGACCAAGCTGGCCTGGAACTCACAGAGATCCAC
CTGCCTCTGCCTCCCAAGTGCTGGGATTAAATGTGTTCACCACCATGCCT
GACATCATAAGTTAATTTTAGTCATAGTTTGACTCTCTGGCTCCTGCTT

Query= MSMg01no317_h24.b1 MSMg01no317_h24.b1 CHROMAT_FILE:
MSMg01no317_h24.b1 PHD_FILE: MSMg01no317_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:31 2005
         (334 letters)



>mm_chr3_123011535_123012268
          Length = 734

 Score =  615 bits (318), Expect = e-180
 Identities = 327/330 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacatacttatacgtatattttagaagtatgtatattgtatgtgtaaaaggaatc 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaattcacatacttatatgtatattttagaagtatgtatattgtatgtgtaaaaggaatc 475

                                                                       
Query: 65  tcaaaaaaataaaatccgtaagagctgtctgaaaagcggtggtgggacggcagcaaggga 124
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcaaaaaaataaaataggtaagagctgtctgaaaagcggtggtgggacggcagcaaggga 415

                                                                       
Query: 125 agcgaagaggctccttccctgtgaccactcattcacactttataattcaaatgtcatcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agcgaagaggctccttccctgtgaccactcattcacactttataattcaaatgtcatcat 355

                                                                       
Query: 185 ctcagctacgtgaagaataatgctgcatagtgtcctaaggtgaggacaaacatcaagtgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ctcagctacgtgaagaataatgctgcatagtgtcctaaggtgaggacaaacatcaagtgt 295

                                                                       
Query: 245 acccatgtttgtccctagagaaaagaggaggagcaacgaatgggtttcaggaaagtggaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acccatgtttgtccctagagaaaagaggaggagcaacgaatgggtttcaggaaagtggaa 235

                                         
Query: 305 attacatatacctaggatgtgttcattccc 334
           ||||||||||||||||||||||||||||||
Sbjct: 234 attacatatacctaggatgtgttcattccc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space:   235625
Effective search space used:   235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no317_h24.g1 MSMg01no317_h24.g1 CHROMAT_FILE:
MSMg01no317_h24.g1 PHD_FILE: MSMg01no317_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:31 2005
         (309 letters)



>mm_chr3_122851259_122851967
          Length = 709

 Score =  598 bits (309), Expect = e-175
 Identities = 309/309 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgactcgtatctttctcagaggatatttctatcttgggccatcagtgccaggatacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgactcgtatctttctcagaggatatttctatcttgggccatcagtgccaggatacag 260

                                                                       
Query: 61  gcctctatgtcattctccttcatgacttggaacatcagctccttccttttcctgcagctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctctatgtcattctccttcatgacttggaacatcagctccttccttttcctgcagctg 320

                                                                       
Query: 121 aggtcactgctagcagtggctgacactcaatcaacaaggtgaaccctcgattgacagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtcactgctagcagtggctgacactcaatcaacaaggtgaaccctcgattgacagatt 380

                                                                       
Query: 181 gatgaccaagctggcctggaactcacagagatccacctgcctctgcctcccaagtgctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgaccaagctggcctggaactcacagagatccacctgcctctgcctcccaagtgctgg 440

                                                                       
Query: 241 gattaaatgtgttcaccaccatgcctgacatcataagttaattttagtcatagtttgact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattaaatgtgttcaccaccatgcctgacatcataagttaattttagtcatagtttgact 500

                    
Query: 301 ctctggctc 309
           |||||||||
Sbjct: 501 ctctggctc 509


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space:   210000
Effective search space used:   210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)