Query= MSMg01no317_i15.b1 MSMg01no317_i15.b1 CHROMAT_FILE:
MSMg01no317_i15.b1 PHD_FILE: MSMg01no317_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:33 2005
(239 letters)
>mm_chr3_119937853_119938491
Length = 639
Score = 435 bits (225), Expect = e-126
Identities = 234/237 (98%)
Strand = Plus / Plus
Query: 3 aaaaaaaacaaaaaaaatgaaaaacaaaaacaaaaaataccatacaacactttccaataa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaaaaaaacaaaaaaaatgaaaaacaaaaacaaaaaataccatacaacactttccaataa 262
Query: 63 tcacttaatttgactttgatggggattagttatgtgaaggaaatggaaattgattatcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcacttaatttgactttgatggggattagttatgtgaaggaaatggaaattgattatcaa 322
Query: 123 attccccgggattatgaacaatctgagagaaagacaatccatttctgcaaactgggaaca 182
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 attccccaggattatgaacaatctgagagaaagacaatccatttctgcaaactgggaaca 382
Query: 183 aaacccctccttcacaacaactctcccccatttagtaccctttaatttatcagactc 239
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 383 aaacccctccttcacaacaacttttccccatttagtaccctttaatttatcagactc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_i15.g1 MSMg01no317_i15.g1 CHROMAT_FILE:
MSMg01no317_i15.g1 PHD_FILE: MSMg01no317_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:34 2005
(533 letters)
>mm_chr3_120113323_120114256
Length = 934
Score = 551 bits (285), Expect = e-161
Identities = 300/305 (98%), Gaps = 3/305 (0%)
Strand = Plus / Minus
Query: 1 catgaaattttgagctaaatggtgagaccctgtatcaaaccctatctcctaaatt-aaaa 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 304 catgaaattttgagctaaatagtgagaccctgtatcaaaccctatctcctaaattaaaaa 245
Query: 60 aaaaaaaagtaactcaagaacaatagagacatagaaatttccaagtggttttatgagaaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 244 aaaaaaaagtaactcaagaacaatagagacatagaaatttccaagtggttttatgaaaaa 185
Query: 120 attcccatgaggctcaggtatttgaacatttggtccccatgagtagctcttttgggaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 attcccatgaggctcaggtatttgaacatttggtccccatgagtagctcttttgggaaca 125
Query: 180 ttctaaa-cttttgggaggtatgacttttctggtggtcctgcatcattgaggcaggattt 238
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttctaaacctttt-ggaggtatgacttttctggtggtcctgcatcattgaggcaggattt 66
Query: 239 gagggtctatagcttcaccccacatccagttttctgtcttgttcatgaatgtgggtaaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagggtctatagcttcaccccacatccagttttctgtcttgttcatgaatgtgggtaaaa 6
Query: 299 ttgca 303
|||||
Sbjct: 5 ttgca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 934
Length adjustment: 10
Effective length of query: 523
Effective length of database: 924
Effective search space: 483252
Effective search space used: 483252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
