Query= MSMg01no318_i10.b1 MSMg01no318_i10.b1 CHROMAT_FILE:
MSMg01no318_i10.b1 PHD_FILE: MSMg01no318_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(328 letters)
>mm_chr3_132548068_132548793
Length = 726
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 15 ggaattcttttctgcttcctcatcctccttcattgcaaccttgaccaccagaccctcgct 74
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggaattcttttctgcttcttcatcctccttcattgcaaccttgaccaccagaccctcgct 467
Query: 75 caattgtgatgatcactcgttttcaatgagagaaaatcagtaatagaaaatttaaggggg 134
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 466 caattgtgatgatcaatcgttttcaatgagagaaaatcagtaatagaaaatttaa-gggg 408
Query: 135 aaaaaaaggagtcgataaacacatccagggtctgagtgttgtggttaacagtgcctgctt 194
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aaaaaaaggagttgataaacacatccagggtctgagtgttgtggttaacagtgcctgctt 348
Query: 195 ttcctctaccttcagttccttaaccttccaacttttacctctgcggctgcagtagctctt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttcctctaccttcagttccttaaccttccaacttttacctctgcggctgcagtagctctt 288
Query: 255 ctttctagttttaagtgtttctttgaaattcgtttcctctctttggcccaaagatgagtt 314
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 287 ctttctatttttaagtgtttctttgaaattcgtttcc-ctctttggcccaaagatgagtt 229
Query: 315 aagcggctccaggt 328
||||||||||||||
Sbjct: 228 aagcggctccaggt 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 726
Length adjustment: 9
Effective length of query: 319
Effective length of database: 717
Effective search space: 228723
Effective search space used: 228723
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_i10.g1 MSMg01no318_i10.g1 CHROMAT_FILE:
MSMg01no318_i10.g1 PHD_FILE: MSMg01no318_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(289 letters)
>mm_chr3_132402881_132403565
Length = 685
Score = 427 bits (221), Expect = e-124
Identities = 271/289 (93%), Gaps = 4/289 (1%)
Strand = Plus / Plus
Query: 1 attgaagttacatgattttgttctaaagtgaaggagcgcaaattgaatgcccagtaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 201 attgaagttacatgattttgttctaaagtgaaggagcgcaaattgaatgaagagcaaatc 260
Query: 61 aagaaatgtgttagttgaacatctcattctttatctagaatgagtaaacagtgctcacgt 120
|||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 261 aagaaacgtgttagttgaacatctcattctttatctagaaagagtaaacaatgctcacat 320
Query: 121 caggtcattggtgggacttggtgatgtcattgaatgcaatgagtacagcgctgacatttc 180
||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||
Sbjct: 321 taggtcattggtgggacttgttgatgtcattgaat-c---gagtacagcgctgacatttc 376
Query: 181 ctttgcttgtcttgaatctgcttattaaaagtacacacagtatttataagcaagtaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctttgcttgtcttgaatctgcttattaaaagtacacacagtatttataagcaagtaactg 436
Query: 241 taaaatactattaataattaggaatagcattagttgagaaaaagtaata 289
|||||||| | ||| |||||||||||||||||||||||||||||||||
Sbjct: 437 taaaatacaaggaatcattaggaatagcattagttgagaaaaagtaata 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 685
Length adjustment: 9
Effective length of query: 280
Effective length of database: 676
Effective search space: 189280
Effective search space used: 189280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
