Query= MSMg01no318_k11.b1 MSMg01no318_k11.b1 CHROMAT_FILE:
MSMg01no318_k11.b1 PHD_FILE: MSMg01no318_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:52 2005
(370 letters)
>mm_chr3_124677517_124678286
Length = 770
Score = 594 bits (307), Expect = e-174
Identities = 352/367 (95%), Gaps = 1/367 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctcaattcctccccatggagagagggagagaatgacttcttttggaacccatt 63
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 464 ggaattcctcaattccttcccatggagagagggagagaataacttcttttggaacccatt 405
Query: 64 ccagaagtagctagaacaagtctacactgaaaagaggaaagaaaaatgaaggaaggaagg 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 404 ccagaagtagctagaacaagtctacactgaaaagaggaaagataaatgaaggaaggaagg 345
Query: 124 ggagaaatcagagaaaaaacaaccccatgctgaatcctaggtagtgacatggaccaatca 183
||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 344 ggagaaatcagagaagaaacaaccccatgctgaagcctaggtagtgacatgggccaatca 285
Query: 184 tccatcacaaggttttctcccagttggcactgatttcatcactcatagtataggaagggc 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 284 tccatcacaaggttttctcccatttggcactgatttcatcactcatagtataggaagggc 225
Query: 244 tatgagtaacaatctcagtgtcacctaagcccaataaagaccaacaaagagcagcaaggc 303
||||||||||||||||||||| | | ||| ||||| ||||||||||||||||||||||||
Sbjct: 224 tatgagtaacaatctcagtgtgagcaaag-ccaatgaagaccaacaaagagcagcaaggc 166
Query: 304 aaaccaatgccacacagtgtcatccactgtctgttgggttatatttatacacttttcaac 363
|||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||
Sbjct: 165 aaaccaatgccacacagtgttatccactgtctgttgggttatacttatactcttttcaac 106
Query: 364 catgaag 370
|||||||
Sbjct: 105 catgaag 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_k11.g1 MSMg01no318_k11.g1 CHROMAT_FILE:
MSMg01no318_k11.g1 PHD_FILE: MSMg01no318_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:52 2005
(341 letters)
>mm_chr3_124503145_124503885
Length = 741
Score = 627 bits (324), Expect = 0.0
Identities = 336/340 (98%)
Strand = Plus / Plus
Query: 1 acccatctgcaaatgtttgcatgcaaagactataactacagatccatagattcaaaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccatctgcaaatgtttgcatgcaaagactataactacagatccatagattcaaaacag 260
Query: 61 ctcagctctctgcaagctttgatcatgcagtggcctgtgtgattaatttcatatacagta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ctcagctctctgcaagctttgatcatgcagcggcctgtgtgattaatttcatatacagta 320
Query: 121 gagtgccactatgatattctcaatgaggcaatgaggctcatgaggatgcagatgtctggg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgccactatgatattcacaatgaggcaatgaggctcatgaggatgcagatgtctggg 380
Query: 181 ctttagtaaataagctagtctgttattcaaaagggctttttggaagagtcttgataatct 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttagtaaataagctagtctgtaattcaaaagggctttttggaagagtcttgataatct 440
Query: 241 ctggctgtaaatgctactgattgccttttgtatggagtttcctatttaaaagaagcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggctgtaaatgctactgattgccttttgtatggagtttcctatttaaaagaagcatca 500
Query: 301 ctgggtggtggataacagcagccacgtctttactgaaacc 340
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 ctgggtggtggataacagcagccatgtctttactgaaacc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
