Query= MSMg01no319_a18.b1 MSMg01no319_a18.b1 CHROMAT_FILE:
MSMg01no319_a18.b1 PHD_FILE: MSMg01no319_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:20 2005
(239 letters)
>mm_chr3_145406204_145406842
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 gccactttgcctctacctagctataaataataagaaagtttaatttgtgaattaggacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccactttgcctctacctagctataaataataagaaagtttaatttgtgaattaggacac 260
Query: 61 agcaagaaattaaccacagaaataaaatacaacagtgatgataatattctgcagtaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaagaaattaaccacagaaataaaatacaacagtgatgataatattctgcagtaaaaa 320
Query: 121 ttatttaaagtttcagaaaagagaagagaagcctgtcttcttagactcagcgagcgccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatttaaagtttcagaaaagagaagagaagcctgtcttcttagactcagcgagcgccgt 380
Query: 181 gcatactggagtttctggggacatcccaggacacgtggagggctctcaagctgggtgca 239
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcgtactggagtttctggggacatcccaggacacgtggagggctctcaagctgggtgca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_a18.g1 MSMg01no319_a18.g1 CHROMAT_FILE:
MSMg01no319_a18.g1 PHD_FILE: MSMg01no319_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:20 2005
(260 letters)
>mm_chr3_145510166_145510825
Length = 660
Score = 466 bits (241), Expect = e-136
Identities = 257/267 (96%), Gaps = 8/267 (2%)
Strand = Plus / Minus
Query: 2 ctgttcagatctaatagtaactcgctgtaaacacaccgccttgtttgagcagtggtttga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctgttcagatctaatagtaactcgctgtaaacacaccgccttgtttgagcagtggtttga 335
Query: 62 aggacatttgaacctgttcatcataagttatattactgtagacataggttctggtgaaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggacatttgaacctgttcatcataagttatattactgtagacataggttctggtgaaga 275
Query: 122 aagcactgcattgtaaggaagcgcgactttacacatctagttctcacagaatcccatttt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aagcactgcattgtaaggaagcgcgactttacacatctagttctcacagaatcccatttt 215
Query: 182 gtaag--------agaaaacagacccctgctctggcctgtcaaagagagtgacagtgctg 233
||||| |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 214 gtaagagaaaacaagaaaacagacccctgctctggtctgtcaaaaagagtgacagtgctg 155
Query: 234 tccccagggggcatggagactgtcctg 260
|||||||||||||||||||||||||||
Sbjct: 154 tccccagggggcatggagactgtcctg 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
