Query= MSMg01no319_l06.b1 MSMg01no319_l06.b1 CHROMAT_FILE:
MSMg01no319_l06.b1 PHD_FILE: MSMg01no319_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:05 2005
(372 letters)
>mm_chr3_115818907_115819674
Length = 768
Score = 623 bits (322), Expect = 0.0
Identities = 355/368 (96%), Gaps = 4/368 (1%)
Strand = Plus / Plus
Query: 5 gaattccaaagagtcttgaccatgttgtaaaaaccaggcaaaggactctgggttagcata 64
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaagagtctagacaatgttgtaaaaaccaggcaaaggactctgggttagcata 264
Query: 65 gtttataaattgtgataaccagcccaggatgtttctgtgggggagacacaaggggagtta 124
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 gtttataaattatgataaccagcccaggatgtttctgtaggggagacacaaggggagtta 324
Query: 125 gaatacagatgaaatgtggatattttcaaatggcggaaagttctacagaactctcttcat 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 gaatacagatgaaatgtggatattttcaaatggtggaaagttctacagaactctcttcat 384
Query: 185 gtcaaaagcacagagaatcacggatagtgtagtgtttgggtgaaatggtggattagaagt 244
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcagaagcacagagaatcacgtatagtgtagtgtttgggtgaaatggtggattagaagt 444
Query: 245 ctctgcatgacgcgtggagaagaaactggataagacagaattggctctatttccaaggga 304
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 445 ctctgcatgactcgtggagaagaaacaggataaga----attggctctatttccaaggga 500
Query: 305 agaaagagaagagtattggaaacacacacacaccactagacagagagtgagacagagaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaagagaagagtattggaaacacacacacaccactagacagagagtgagacagagaga 560
Query: 365 aagagagg 372
||||||||
Sbjct: 561 aagagagg 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 768
Length adjustment: 9
Effective length of query: 363
Effective length of database: 759
Effective search space: 275517
Effective search space used: 275517
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_l06.g1 MSMg01no319_l06.g1 CHROMAT_FILE:
MSMg01no319_l06.g1 PHD_FILE: MSMg01no319_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:05 2005
(348 letters)
>mm_chr3_115982142_115982888
Length = 747
Score = 661 bits (342), Expect = 0.0
Identities = 345/346 (99%), Gaps = 1/346 (0%)
Strand = Plus / Minus
Query: 1 attaaagcgttgagaagcctcctttgtcggaatatgtatcagtgtgcgcattttgtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 attaaagcgttgagaagcctcctttgtcggaatatgtatcagtgtgcgcattttgtgtgt 486
Query: 61 taattcttaggcagtgcagaaagcctcaagctgttatagagacatgaaagggctataagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 taattcttaggcagtgcagaaagcctcaagctgttatagagacatgaaagggctataagg 426
Query: 121 gaaaaacagagagttgtagattaaaaatttcccagtgttcacttcttctttaatactttg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 425 gaaaaacagagagttgtagattaaaaa-ttcccagtgttcacttcttctttaatactttg 367
Query: 181 gatgcaagggtataaataaaaccttatattatcaaatatatagttttcttaattacctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gatgcaagggtataaataaaaccttatattatcaaatatatagttttcttaattacctaa 307
Query: 241 agtgttaaaataaactattttttctttgatgcatttgcctctatagttagaatccacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtgttaaaataaactattttttctttgatgcatttgcctctatagttagaatccacact 247
Query: 301 ggggaataacaagcagaccgtatgtgtcattcttagagacttgggg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggggaataacaagcagaccgtatgtgtcattcttagagacttgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 747
Length adjustment: 9
Effective length of query: 339
Effective length of database: 738
Effective search space: 250182
Effective search space used: 250182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
