Query= MSMg01no319_n08.b1 MSMg01no319_n08.b1 CHROMAT_FILE:
MSMg01no319_n08.b1 PHD_FILE: MSMg01no319_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:14 2005
(323 letters)
>mm_chr3_123264778_123265498
Length = 721
Score = 373 bits (193), Expect = e-108
Identities = 203/207 (98%), Gaps = 2/207 (0%)
Strand = Plus / Minus
Query: 114 acaataattttcttaaaggatgaagaattattttaaactcatttttgttaggaaacatgt 173
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 acaataattttcttaaatgatgaagaattattttaaactcatttttgttaggaaacatgt 459
Query: 174 taacatttcagggggaaaaaaaaacctctcactgaaccttgtcaataacatacttcactg 233
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 taacatttcagggg--aaaaaaaacctctcactgaaccttgtcaataacatacttcactg 401
Query: 234 cacagtaatataatgacagcttttaggatatatacaaagtctaaaaacaggtcatgatgg 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacagtaatataatgacagcttttaggatatatacaaagtctaaaaacaggtcatgatgg 341
Query: 294 aaatccttatgtcgaccatttaatttt 320
||||||||||||||| |||||||||||
Sbjct: 340 aaatccttatgtcgagcatttaatttt 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 721
Length adjustment: 9
Effective length of query: 314
Effective length of database: 712
Effective search space: 223568
Effective search space used: 223568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_n08.g1 MSMg01no319_n08.g1 CHROMAT_FILE:
MSMg01no319_n08.g1 PHD_FILE: MSMg01no319_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:14 2005
(337 letters)
>mm_chr3_123087648_123088385
Length = 738
Score = 495 bits (256), Expect = e-144
Identities = 305/338 (90%), Gaps = 27/338 (7%)
Strand = Plus / Plus
Query: 1 tctggtgagggctggctagggaaaa-cgttaaaatttggaaacctagtcctaatgtactg 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtgagggctggctagggaaaaacgttaaaatttggaaacctagtcctaatgtacta 260
Query: 60 gtgaacgtaacacctcctgtctctaataaattaccaagtaaggattcaaacgtttggttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgaacgtaacacctcctgtctctaataaattaccaagtaaggattcaaacgtttggttg 320
Query: 120 aaggtagactgcgttccaagtgcagaatctaaaatttgctctaacttaggttgcttccaa 179
||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aaggtagactgtgttctaagtgcagaatctaaaatttgctctaacttaggtggcttccaa 380
Query: 180 tgagtctttcgacaggatctcaagaaaataatcaaacttccttcaaaaccaatctcaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tgagtctttcgacaggatctcaagaaaataatcaaacttccttcaaaaccaatatcaaga 440
Query: 240 attcgaagctgggctagggatggctcaaagattaagaacatgcactgctcttccaaagga 299
| |||||||||||||||||||||||||||||||||
Sbjct: 441 a--------------------------aagattaagaacatgcactgctcttccaaagga 474
Query: 300 cctgagttcaagtcccaagcactcacaccaggaggctc 337
|||||||||||||||||||||| |||||||||||||||
Sbjct: 475 cctgagttcaagtcccaagcacccacaccaggaggctc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
