Query= MSMg01no320_f15.b1 MSMg01no320_f15.b1 CHROMAT_FILE:
MSMg01no320_f15.b1 PHD_FILE: MSMg01no320_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:50 2005
(286 letters)
>mm_chr3_45295628_45296314
Length = 687
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 tgcatgcacacatacatacatctgtaccaatatgtatgtgtatctcacacgtgtaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgcatgcacacatacatacatctgtaccaatatgtatgtgtatctcacacgtgtaagaaa 428
Query: 61 actttttaaaaatccactctttgtttaaatatcactttaaacattaata-tttaatatat 119
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Sbjct: 427 actttttaaaaatccactctttgtttaaatatcactttaaacattaatattttaatatat 368
Query: 120 gtgaatatattatcaataactcacttctaaagtttcccttatatttaaaatcaatgttaa 179
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Sbjct: 367 gtgaatatattatcaataactcacttctaaagtttcccttatatttaaaatcaatgttaa 308
Query: 180 gaattacatgttttgtagctttttactaccattgtaaatgcctgagatcatcaatttaat 239
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Sbjct: 307 gaattacatgttttgaagctttttactaccattgtaaatgcctgagatcatcaatttaat 248
Query: 240 gaagcaggtttatttgggctaacagtttggagtatttcaaacaaaga 286
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Sbjct: 247 gaagcaggtttatttgggctaacagtttggagtatttcaaacaaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_f15.g1 MSMg01no320_f15.g1 CHROMAT_FILE:
MSMg01no320_f15.g1 PHD_FILE: MSMg01no320_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:51 2005
(282 letters)
>mm_chr3_45129137_45129818
Length = 682
Score = 294 bits (152), Expect = 4e-84
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 131 tctgttgcttctctttgttttggtctcttggaagccaaggtcagtaaagaaacagtgaag 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tctgttgcttctctttgttttggtctcttggaagccaaggtcagtaaagaaacagtgaag 390
Query: 191 acaaattttagttttttaaaaaatttacctccattttcacatgatatatatggggaatgt 250
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Sbjct: 391 acaaattttagttttttaaaaaatttacctccattttcacatgatatatatggggaatgt 450
Query: 251 gtggactcagaggaataagccactgtcatttt 282
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Sbjct: 451 gtggactcagaggaataagccactgtcatttt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
