Query= MSMg01no322_m12.b1 MSMg01no322_m12.b1 CHROMAT_FILE:
MSMg01no322_m12.b1 PHD_FILE: MSMg01no322_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:49 2005
(245 letters)
>mm_chr3_154702598_154703242
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 238/245 (97%), Gaps = 5/245 (2%)
Strand = Plus / Minus
Query: 1 ccaatctaaaagctcataatatcatcagatgtagctggcacctgtggcacgtttccccac 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 541 ccaatctaaaagctcataatatcatcagatgtagctggcacctgtggcaggtttccccac 482
Query: 61 ctctctgtatcctgctgcccccaacaaggtgtttgtaaatgaaatgacttgtggtgtggt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 481 ctctctgtatcctgctgcccccaacaaggtgtttgt-----aaatgacttgtggtgtggt 427
Query: 121 acttagtgcttaacagcacacattgctcttattgaggacccaaattcattcttcagttca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 426 acttagtgcttaacagcacacgttgctcttattgaggacccaaattcattcttcagttca 367
Query: 181 ccagtcagcctttggccacctgaaactataggtccagggcgtctgagctctgtttctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ccagtcagcctttggccacctgaaactataggtccagggcgtctgagctctgtttctgtg 307
Query: 241 ctcaa 245
|||||
Sbjct: 306 ctcaa 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_m12.g1 MSMg01no322_m12.g1 CHROMAT_FILE:
MSMg01no322_m12.g1 PHD_FILE: MSMg01no322_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:49 2005
(289 letters)
>mm_chr3_154541882_154542570
Length = 689
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%)
Strand = Plus / Plus
Query: 1 ctgctgccaagagatggaacctccacttaaatttcagttttcagagtcacccagaccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ctgctgccaagagatggaacctccacttaaatttcagttttcagagtcaaccagaccctg 260
Query: 61 agggagacaaccgaatactcatcttcaataatgaggtgaagagttggtggaaaccaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggagacaaccgaatactcatcttcaataatgaggtgaagagttggtggaaaccaacct 320
Query: 121 agtgtgtctttgtaccagtatgagtcagcaggccaagaccaaccttcctcctcctcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgtgtctttgtaccagtatgagtcagcaggccaagaccaaccttcctcctcctcccca 380
Query: 181 gtgctgtgctgataatcaaggttctgcaaggaatatgcagataagggaaaagctcttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgctgtgctgataatcaaggttctgcaaggaatatgcagataagggaaaagctcttgct 440
Query: 241 acaaacagtatacctgggaagctagctaacctggtgttagggtctca 287
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaacagtagacctgggaagctagctaacctggtgttagggtctca 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
