NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTACGTAACTAAGGGGTCATGTCCTATTATTTGGCAATGTACC
CGGTTCATTCTGAGGTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTT
GGAACAATCTTTAGTTGGGAGGGTTCGAACTCTAGGGTAAGGAGTTCAGG
AATGCATTCTGGGGTGAAGAGTTCAGGAGTGTTCTGGGAACAATCTCTAG
ATGGGAGGGGTCGGGCTCTGGGGTGAGGAAGAGTTCAGTAATTTTTTATC
TTTATTCTTCAGTTACACCCATCAGAATGGCTAAGATCAAAAACTCAAGT
AGCAGCACATGCTGGCAAAGATGTGGAGCAAGCAGAACACTCCTCCACTG
TTGGCGGGAGTGCAAACTTGTAAAAATACTCTGGAAATCACGCTGGAAGT
TTCTTAAAAGTTGAAGAGTTCTACCTCACAACTCAGCTACTGGGCATATA
CCTAAAAGAGGTTCCATCTTACCACAAGAACACTTGTTCCTCTATGGTCA
TGGCAGCCTTATTTGTAATATCCAGAAACTGGAAACAACACATATGTCCC
TCAACAAGAAAAAAAAATGTGGATCATTTACCCAATGGAACACTACTCAG
CTATTAAAAACAAGAACATCATGGATTTTGCATTCAAATGGATGGAACTA
GAGAAATAACCTGAGTGAGCT

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCACACTTTTGCATTTGTAA
TAATTGGTCTGGTAAGTGTTGATTTGGCCACAGTCATTAATATTTATGAA
ACATGATTGCTCAGTATTTTTTTTATAACAACATGTACCACTCTGGACTT
TGTTACCAATTGGTGTCTGCTTTCACTATGAATAATAATAAAAACTTAAA
TAAAACAGTCACTGGAACAAGGGAGGATTTACAGTAGGAAAATTTGGAAC
AGATTTCTGATCCATGCATTAGTTTATAAATGTAAAATTAGTTTATAAAT
GTAAAATTAGTTTGTAAATGTAAAAAATACACTAGATCTGTTGTTGCTCA
TCATTTCCATCCATCTTGCCAAAGTCTATACCTCAAGACAAAGTTAGAAT
TTAATAGCTTCTATTGCATAATTATAATATTTTTTCTACACAAAGTTAGT
ACTAAAATAAGTTTATATATATATAACATACATTATGTATGCATCTCTCT
CTCTCTATATATATGTATATATATATACATATATATATACATATATATAT
AGTTGTCACTTTTAAAGTTACTTGTGATATTCAGTTTTAGTTAGCAACTT
GACAGAGTTCTAGAGTCACCTATGAAGAGGGAACCTCAACTATAGAATTG
TTTAGATCAAGGCTGGCCTGTG

Query= MSMg01no324_g13.g1 MSMg01no324_g13.g1 CHROMAT_FILE:
MSMg01no324_g13.g1 PHD_FILE: MSMg01no324_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:43 2005
         (643 letters)



>mm_chr3_10690162_10691200
          Length = 1039

 Score =  940 bits (486), Expect = 0.0
 Identities = 593/648 (91%), Gaps = 39/648 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcacacttttgcatttgtaataattggtctggtaagtgttgatttggccacagtcatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacacttttgcatttgtaataattggtctggtaagtgttgatttggccacagtcatta 260

                                                                       
Query: 61  atatttatgaaacatgattgctcagtattttttttataacaacatgtaccactctggact 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 atatttatgaaacatgattgctcagtattttttt-ataacaacatgtaccactctggact 319

                                                                       
Query: 121 ttgttaccaattggtgtctgctttcactatgaataataataaaaacttaaataaaacagt 180
           || |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 320 ttcttaccaattggtgtctgcttgcactatgaataataataaaaatttatataaaacagt 379

                                                                       
Query: 181 -cactggaacaagggaggatttacagtaggaaaatttggaacagatttctgatccatgca 239
            | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 380 tc-ctggaacaagggaggatttacagtgggaaaatttggaatagatttctgatccatgca 438

                                                                       
Query: 240 ttagtttataaatgtaaaattagtttataaatgtaaaattagtttgtaaatgtaaaaaat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttagtttataaatgtaaaattagtttataaatgtaaaattagtttgtaaatgtaaaaaat 498

                                                                       
Query: 300 acactagatctgttgttgctcatcatttccatccatcttgccaaagtctatacctcaaga 359
           ||| ||| |||||||   ||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 499 acattagttctgttg---ctcatcatttccatccatcttgggaaagtctatacctcaaga 555

                                                                       
Query: 360 caaagttagaatttaatagcttctattgcataattataatattttttctacacaaagtta 419
           |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 556 caaagttagaatttaatagcttctattgcataattacaatactttttctacacaaagtt- 614

                                                                       
Query: 420 g-tactaaaataagtttatatatatataacatacattatgtatgcatctctctct--ctc 476
           | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||
Sbjct: 615 gatactaaaataagtttatatatatataacatacattatgtatgcatatctatctatctc 674

                                                                       
Query: 477 tatatatatgtatatatatatacatatatatatacatatatatatag-ttgtcactttta 535
           ||| |||               |             ||||||||| | ||||||||||||
Sbjct: 675 tatctat---------------c-------------tatatatatggattgtcactttta 706

                                                                       
Query: 536 aagttacttgtgatattcagttttagttagcaacttgacagagttctagagtcacctatg 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aagttacttgtgatattcagttttagttagcaacttgacagagttctagagtcacctatg 766

                                                           
Query: 596 aagagggaacctcaactatagaattgtttagatcaaggctggcctgtg 643
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 aagagggaacctcaactatagaattgtttagatcaaggctggcctgtg 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1039
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1029
Effective search space:   651357
Effective search space used:   651357
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)