CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAAGCTATCTTCCACTTTCTCTTCTGTTCTTCTATCAGGTTCAGT
GTATCTGGTTTTGTGTTGAGGTCTTTGGTCCATTTAGAGTTGAGTTTTGT
GCAAGGTAGTAAGTATGGATCTATTTGAATTCTTTTTACATGTAATGTCC
CAGTTTGCCCAGCACCATTTGTTGAAGATGCTGGCCTTTCCCAATGTGTG
TATCTGGCTTCTCTGCCAAAACTCATGTGTCCATAGATGTATGGATTTAT
GTCCAGATCTTCAATTCTATTTTGTTGACATGTCTAGTTTTATGCCAATA
TCATGTTGTTTTTGTTACTATAGCTCTATAGTACAACTTAAAATTGGGAA
TTGTGATATCTCCTGCACTTCTTTTATTATTCAGTATTGTTTTAGCCAGC
TTTGATTTTTTTTGTATTTAAATTTAAAAACTACTTATTTTTAAAAAGAT
AAACATCAGAAGAGTAGGGGTTACCGCTCAGTAGTAGAACACTTACCTAA
TAAGACCAGGACCCTGCATTCGATCCACAAAAGGTATTACCAGGGACAAA
AGTCATTTCATAATAATAAAGGGTCTTTTTAGTAAGAGAACATAATAATC
CTAAATGCTCAAATGAGTTTAAATTCCCAGCACCCATGTTAAAAGCTATG
CATGGCTTCTCACTGTGTGGGAAATAGAGACAGGTATTTGCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAAGGAAAGTTAAAGCTATTTATA
TCCGTGGTTTACAGATAAAATTTGCTGTTTCTATGTAATGTTCCCAGTCT
TCTCTTTAAAGAAGTTAAGGTTTCTGTTACAAGAAGATAAACTTGTAAGA
TTTAACTACTTTTATTGGTGACTGTTTATTCTGTTTTCAATGTATAAAAC
CTTCAGTTTGTTGACATTGAAAGAGTGTTCCTATTTAAAAATAAGCTTTA
GAGATTTCTGTGTTGAGTAGCAGTCTTGTATTAGCCATCTGTTTCACAGT
ATACTTCCTTGAACTACTTTCAGAGTATCAGTCCTTGTAACTCATGAGTG
AGACCAGCCATGCTTGAACACTCCCAGTCTAAATGCTTGTAATTCATGTG
TTTCAGGCATACTACAGAAAGTAACTATCATATAAATTCTTAATAACCAG
AGACCAACATTTCCTAAAGACAAATTTGTTTTCCAATAAGTTAATGAGCA
AATAAAGAATAGGTAATAGAGAACCTTTCCCAGGTGGCGTTTGGTGGTCT
TGAGTGTTACTACCTATCCCTGAGTTCTCTGAGTACATGAGGCTTGTCTC
CCTTAGTGTGTATGTGTAGTGCCGCCTCTGCATTGTTGATCAAGGATGTT
TACCTGATTGGGAAGACAGTCTGGCAAGCCTTGATTCAACTTACT

Query= MSMg01no324_o08.g1 MSMg01no324_o08.g1 CHROMAT_FILE:
MSMg01no324_o08.g1 PHD_FILE: MSMg01no324_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:19 2005
         (653 letters)



>mm_chr3_65757756_65758808
          Length = 1053

 Score = 1232 bits (637), Expect = 0.0
 Identities = 649/653 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaggaaagttaaagctatttatatccgtggtttacagataaaatttgctgtttctatgt 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 853 aaaggaaagttaaagctatttatatccgcggtttacagataaaatttgctgtttctatgt 794

                                                                       
Query: 61  aatgttcccagtcttctctttaaagaagttaaggtttctgttacaagaagataaacttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aatgttcccagtcttctctttaaagaagttaaggtttctgttacaagaagataaacttgt 734

                                                                       
Query: 121 aagatttaactacttttattggtgactgtttattctgttttcaatgtataaaaccttcag 180
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 733 aagatttaactacttttattggtggctgtttattctgttttcaatgcataaaaccttcag 674

                                                                       
Query: 181 tttgttgacattgaaagagtgttcctatttaaaaataagctttagagatttctgtgttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tttgttgacattgaaagagtgttcctatttaaaaataagctttagagatttctgtgttga 614

                                                                       
Query: 241 gtagcagtcttgtattagccatctgtttcacagtatacttccttgaactactttcagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtagcagtcttgtattagccatctgtttcacagtatacttccttgaactactttcagagt 554

                                                                       
Query: 301 atcagtccttgtaactcatgagtgagaccagccatgcttgaacactcccagtctaaatgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atcagtccttgtaactcatgagtgagaccagccatgcttgaacactcccagtctaaatgc 494

                                                                       
Query: 361 ttgtaattcatgtgtttcaggcatactacagaaagtaactatcatataaattcttaataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttgtaattcatgtgtttcaggcatactacagaaagtaactatcatataaattcttaataa 434

                                                                       
Query: 421 ccagagaccaacatttcctaaagacaaatttgttttccaataagttaatgagcaaataaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccagagaccaacatttcctaaagacaaatttgttttccaataagttaatgagcaaataaa 374

                                                                       
Query: 481 gaataggtaatagagaacctttcccaggtggcgtttggtggtcttgagtgttactaccta 540
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 373 gaataggtaatagagaacctttcccaggtggcgtctggtggtcttgagtgttactaccta 314

                                                                       
Query: 541 tccctgagttctctgagtacatgaggcttgtctcccttagtgtgtatgtgtagtgccgcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tccctgagttctctgagtacatgaggcttgtctcccttagtgtgtatgtgtagtgccgcc 254

                                                                
Query: 601 tctgcattgttgatcaaggatgtttacctgattgggaagacagtctggcaagc 653
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tctgcattgttgatcaaggatgtttacctgattgggaagacagtctggcaagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)