Query= MSMg01no325_d15.b1 MSMg01no325_d15.b1 CHROMAT_FILE:
MSMg01no325_d15.b1 PHD_FILE: MSMg01no325_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:42 2005
(655 letters)
>mm_chr3_155802877_155803930
Length = 1054
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 taatataatgtagtcttaacattcttaaaagaaaattttatacatgatatcttgataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 taatataatgtagtcttaacattcttaaaagaaaattttatacatgatatcttgataaac 795
Query: 61 atgacatattcttcccccttcccaaactcctccaagatatccccacatctgtacttaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 794 atgacatattcttcccccttcccaaactcctccaagatatccccacatctgtactt-aaa 736
Query: 121 aaaaaaaataggacacagaggacagagtatggagaacataaatgcatacttatgtagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaaaaaaataggacacagaggacagagtatggagaacataaatgcatacttatgtagtct 676
Query: 181 tcactatcatcacaatgtcctaagcacagatgcttggctcctgtttgtgatatatacggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcactatcatcacaatgtcctaagcacagatgcttggctcctgtttgtgatatatacggg 616
Query: 241 agaacagtgctggctgagtggacaccattgacactttgaacagccttgtatactttcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agaacagtgctggctgagtggacaccattgacactttgaacagccttgtatactttcaga 556
Query: 301 aaacaaaatgatgtcttaacgttcaagatctgtgaaaagataggaaccttccttgtctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaacaaaatgatgtcttaacgttcaagatctgtgaaaagataggaaccttccttgtctcc 496
Query: 361 cagattcccggacatggtttttaaacaccagaaagctgggttggaaagagagcaagtatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cagattcccggacatggtttttaaacaccagaaagctgggttggaaagagagcaagtatg 436
Query: 421 agtaggctattctcagggatggtcttctcagctgggtgtgatggaggtcacaaaaacagc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 435 agtaggctattctcagggatggtcttctcagctgggtgtgatggaggtcacagaaacagc 376
Query: 481 ccgtgatgagcctcaggaatgtcacttgagaaatgcatgctttcttgtagcaccctagct 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 375 ccgtgatgagcctcaggaatgtcacttgagaaatgcgtgctttcttgtagcaccctagct 316
Query: 541 atgtgtgtgtgacaatacagtgtgatatcagaatggaagaaatcttgctttcccttctag 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 315 atgtgtgtgtgacaatacagtgtgatctcagaatggaagaaatcttgctttcccttctag 256
Query: 601 gaaaagccaaatgggctatcttcaaatattaattaatattgtctcagaatttgaa 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaaagccaaatgggctatcttcaaatattaattaatattgtctcagaatttgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1054
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1044
Effective search space: 673380
Effective search space used: 673380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_d15.g1 MSMg01no325_d15.g1 CHROMAT_FILE:
MSMg01no325_d15.g1 PHD_FILE: MSMg01no325_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:42 2005
(648 letters)
>mm_chr3_155671328_155672375
Length = 1048
Score = 1160 bits (600), Expect = 0.0
Identities = 636/648 (98%)
Strand = Plus / Plus
Query: 1 attatgtataaataaagtatgtgctggacatatggaggtgcattttaatatttgtcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatgtataaataaagtatgtgctggacatatggaggtgcattttaatatttgtcagtt 260
Query: 61 ctagtggccatgtacaagcaaatgtatgtgagctatagattttcattgttcttatctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagtggccatgtacaagcaaatgtatgtgagctatagattttcattgttcttatctgta 320
Query: 121 agcaaagagacagaaaaatacaaaagaacaaatagttacatagtgtaattatcatcccct 180
|||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 321 agcaaacagacagaaaaatacaaaagaccaaatggttacatagtgtaattatcatcccct 380
Query: 181 gagtagaataagtggttaaagcacaaaacaattttaaaatgctcgaaagaccacaaatac 240
||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 gagcagaataagttgttaaagcacaaaataattttaaaatgctcgaaagaccacaaatac 440
Query: 241 ttatttcttaattgaatagaattaaattgacaattacatgttagtgttttaaagtatata 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ttatttcttaattgaatagaattaaattgacaatcacatgttagtgttttaaagtatata 500
Query: 301 aaagatctttcagaactgcatatttacattcagggacatactgtattaaacagttgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagatctttcagaactgcatatttacattcagggacatactgtattaaacagttgaaaa 560
Query: 361 ctggtaagaagtagaactttagaatgaacactgaacatatatgaagttacattattagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggtaagaagtagaactttagaatgaacactgaacatatatgaagttacattattagaa 620
Query: 421 ggaaatgcttacattgtgtgtatttacactgcatataatagtggaagatttacaaatatc 480
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 621 ggaaatgcttacattgtgtgtatttgcactgcatataatagtggaagatttccaaatatc 680
Query: 481 tgtacattatttcaatccacgcatttaaaaattgaatctctttgaagcaggagagattaa 540
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 tgtacattatttcaatccacacatttaaaaattgaatatctttgaagcaggagagattaa 740
Query: 541 aagaaatcacccagaacagcacaaggcattaaaaggtgacaatggtagaacaaaaactag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagaaatcacccagaacagcacaaggcattaaaaggtgacaatggtagaacaaaaactag 800
Query: 601 ctatgtgaaaaggaagtaggaaacaacagggctgtgttctgtatccta 648
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 801 ctatgtgaaaaggaagtaggaaacaacagggctgtgttctgtgtccta 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
