Query= MSMg01no325_h15.b1 MSMg01no325_h15.b1 CHROMAT_FILE:
MSMg01no325_h15.b1 PHD_FILE: MSMg01no325_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:59 2005
(691 letters)
>mm_chr3_149436712_149437802
Length = 1091
Score = 1266 bits (655), Expect = 0.0
Identities = 679/687 (98%)
Strand = Plus / Plus
Query: 5 gaattctaaaagtattccactgcagccaacaaggctgggtcgcagatacctagctgcaac 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaaagtagtacactgcagccaacaaggctgggtcgcagatacctagctgcaac 264
Query: 65 tggtaaagaaaaaagtaggagacagacacaagtattgtaaagttatgatcaggtaggaat 124
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 tggtaaaggaaaaagtaggagacagacacaagtattgtaaagttaggatcaggtaggaat 324
Query: 125 gcaattatacgaagatgccagaagtctagaatctcattgagtgtatcatatacttcatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcaattatacgaagatgccagaagtctagaatctcattgagtgtatcatatacttcatga 384
Query: 185 acaagaagatgggttaggtaatctcagtctatgaggatatggtttcaggggcatgtgatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaagaagatgggttaggtaatctcagtctatgaggatatggtttcaggggcatgtgatc 444
Query: 245 tcgaagtatctgggatgaaagggctgtggtcagtactccatgttctcactgtgtttagct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcgaagtatctgggatgaaagggctgtggtcagtactccatgttctcactgtgtttagct 504
Query: 305 aaagatcagtggtctgtcaacatccttatgtagggctgcctccttaaaatcataagtcta 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaggtcagtggtctgtcaacatccttatgtagggctgcctccttaaaatcataagtcta 564
Query: 365 aggctatgctcttgttaacatggcatactctctcagggccatatctgttatccacagaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggctatgctcttgttaacatggcatactctctcagggccatatctgttatccacagaag 624
Query: 425 gaatttcagaatatgtgtggacaccttaagataataaataggatactttcactgggagga 484
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 625 gaatttcagaatatgtgtggacaccctaagataataaataggattctttcactgggagga 684
Query: 485 gatgggtgttcctcacttttcccgattatccaacccacactctttggctcccacctcagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatgggtgttcctcacttttcccgattatccaacccacactctttggctcccacctcagt 744
Query: 545 cttcaaatccaacagctttaaacatctttctgtttctgaagtctagttctacctctttca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttcaaatccaacagctttaaacatctttctgtttctgaagtctagttctacctctttca 804
Query: 605 ttgtactgtaaaggactcctggttacccagggcttccttggtgaacagagcatcctctcc 664
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 805 ttgtactgtaaaggactcctggtttcccagggcttccttggtgaacagagcatcctctcc 864
Query: 665 ttgtggaaacctgaacaccaccttcag 691
|||||||||||||||||||||||||||
Sbjct: 865 ttgtggaaacctgaacaccaccttcag 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_h15.g1 MSMg01no325_h15.g1 CHROMAT_FILE:
MSMg01no325_h15.g1 PHD_FILE: MSMg01no325_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:59 2005
(663 letters)
>mm_chr3_149597190_149598252
Length = 1063
Score = 899 bits (465), Expect = 0.0
Identities = 506/539 (93%), Gaps = 30/539 (5%)
Strand = Plus / Minus
Query: 1 aataatttgcaaaataaagaggaaagtataggttgcgtggggttatccacaaagagctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aataatttgcaaaataaagaggaaagtataggttgcgtggggttatccacaaagagctca 480
Query: 61 tcattttggaaactcactctgtgctgtaaaatagggatccacctatgcctcacctttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcattttggaaactcactctgtgctgtaaaatagggatccacctatgcctcacctttgct 420
Query: 121 ggatcattttatgatcaaggaagcccttttcaagctagcagactgtggtagaataaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggatcattttatgatcaaggaagcccttttcaagctagcagactgtggtagaataaaaga 360
Query: 181 agcttgacaattttattcactgttcttcatgagtttcccaaataataaatggtgaattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agcttgacaattttattcactgttcttcatgagtttcccaaataataaatggtgaattta 300
Query: 241 tataaattgatatgggaaaaaaaggacaatccacaggggatttttaacttaacccaaaaa 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tataaattgctatgggaaaaaaaggacaatccacaggggatttttaacttaacccaaaaa 240
Query: 301 agagacacaagtgtcacagagaaaaaaggcttgactctgaaaaaaaaaataaa------- 353
|||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 239 ggagacacaagtgtcacagagaaaaaaggcttgactctgaaaaaaaaaaaaaaaaaaaaa 180
Query: 354 -----------------------gaaaagaaaagaaaaaagaaaaaccctgagcttttga 390
|||||||||||||||||||||||||||||||||||||
Sbjct: 179 aaaaaaaaaaaaaaaaaaaaaaagaaaagaaaagaaaaaagaaaaaccctgagcttttga 120
Query: 391 taccatttctgaatgtcttagaggatgatttaatgtctgtcttataagacaagagactca 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 taccatttctgaatgtcttagaggatgatttaatgtctgtcttataagacaagagactca 60
Query: 451 gctaggtgaatatgcagttgcatgtaagtatgcggtgtattatataagtattgtatatc 509
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 gctaggtgaatatgcagttgcatgtaagtatgcggtgtattatataagtattgtatatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
