TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCGAGAATCCGCGG
AATTCATATACACATACCCAAGAATGCATTCAGTATGTTTACTCCCTAAG
CCCTTGACTTTCTCCACTCTCAGATGGGAAAGGTCATCTGAACTGCACTG
TTAACACCAGCCCCTTTGAGGGAGAAACGGAAGGAAGTTCATCTAGAGCC
CTTCATTCTTACATCCTTGACATGCCCGGAGGTCAGGGGCTGGCCACAAC
AGCTCCATAGCTACTATTTCCACAAGATACAGGAAATCACTGCACCCCTT
TTATATCAGGGAGGCATCTATGATTCCAGCCCACCTTTCTTCTAGAGTTC
TTGCTCTGCCTTGCTATTTTTTTCTTTTGAAGAAAGATCTTTCTGCCAAG
GGCAAAATACATGAATCCATACGTCCTTTTTTTTTCTTCATTAGTCTGTC
TACAGTTTACAATTTTACTCTCGTTTATCCCAACTGAATTCTTAGTCATG
CAATAATCAAAATGTAAACTATCCTTTTCTCCTTCACCTTCCCTCCTCTT
ATTTTATTCTAGGCCCATTTCAACTCCCAAGTTAGAACTTGAAATTTTAT
GACATATCACCCAAATTCCTAAGTGTCCCTGAACACACTAACACATTCTT
TTACTCGACTCACATTTTACATCCACTTCAATGAAATTTGATTACCCAGC
ATCGGTGTCTTTTGGCCCCAGATAATTTGAGATAGTGATAATGTGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGATTACCGAATGGCAGAGAAGCA
CCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAAT
TCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCT
CCATTGTTGGTGGAATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCT
GGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGCCCCAGCTGGTAAGAAGGACAC
ATGCTCCACTATGCTCACAGCAGCCTTATTTATAATAGCCAGAAGCTGGA
AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATCTACACGATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTCCTAGGCAAATGGATGGACCTGAAGGGCATCATACTGAGTGAGGTAA
CACATTCACTGAGGAACTCACACAATATTTTCTCACTGATAAGAGGATAT
TAGCCCCAAACCTAGGATACCCNAGATATAAGATACCATTTGCTAAACAC
GTGACACTCAAGAAGAATGAAGACTGATGTGTGTACACTATGC

Query= MSMg01no325_k17.b1 MSMg01no325_k17.b1 CHROMAT_FILE:
MSMg01no325_k17.b1 PHD_FILE: MSMg01no325_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:13 2005
         (702 letters)



>mm_chr3_119916621_119917723
          Length = 1103

 Score = 1295 bits (670), Expect = 0.0
 Identities = 691/698 (98%), Gaps = 1/698 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcatatacacatacccaagaatgcattcagtatgtttactccctaagcccttgact 65
           ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 903 gaattcatatacacacacgcaagaatgcattcagtacgtttactccctaagcccttgact 844

                                                                       
Query: 66  ttctccactctcagatgggaaaggtcatctgaactgcactgttaacaccagcccctttga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ttctccactctcagatgggaaaggtcatctgaactgcactgttaacaccagcccctttga 784

                                                                       
Query: 126 gggagaaacggaaggaagttcatctagagcccttcattcttacatccttgacatgcccgg 185
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 783 gggagaaacggaaggaagttcatctagagcccttcattcttacatcgttgacatgcccgg 724

                                                                       
Query: 186 aggtcaggggctggccacaacagctccatagctactatttccacaagatacaggaaatca 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aggtcaggggctggccacaacagctccatagctactatttccacaagatacaggaaatca 664

                                                                       
Query: 246 ctgcaccccttttatatcagggaggcatctatgattccagcccacctttcttctagagtt 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ctgcaccccttttatatcagggaggcatctatgattccagcccacctttcttctagagtt 604

                                                                       
Query: 306 cttgctctgccttgctatttttttcttttgaagaaagatctttctgccaagggcaaaata 365
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cttgctctgccttgttatttttttcttttgaagaaagatctttctgccaagggcaaaata 544

                                                                       
Query: 366 catgaatccatacgtcc-tttttttttcttcattagtctgtctacagtttacaattttac 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 catgaatccatacgtccttttttttttcttcattagtctgtctacagtttacaattttac 484

                                                                       
Query: 425 tctcgtttatcccaactgaattcttagtcatgcaataatcaaaatgtaaactatcctttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tctcgtttatcccaactgaattcttagtcatgcaataatcaaaatgtaaactatcctttt 424

                                                                       
Query: 485 ctccttcaccttccctcctcttattttattctaggcccatttcaactcccaagttagaac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctccttcaccttccctcctcttattttattctaggcccatttcaactcccaagttagaac 364

                                                                       
Query: 545 ttgaaattttatgacatatcacccaaattcctaagtgtccctgaacacactaacacattc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgaaattttatgacatatcacccaaattcctaagtgtccctgaacacactaacacattc 304

                                                                       
Query: 605 ttttactcgactcacattttacatccacttcaatgaaatttgattacccagcatcggtgt 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttttactcgactcacattttacatccacttcaatgaaatttgattacccagcatcggtgt 244

                                                 
Query: 665 cttttggccccagataatttgagatagtgataatgtgt 702
           || |||||||||||||||||||||||||||||||||||
Sbjct: 243 ctcttggccccagataatttgagatagtgataatgtgt 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1103
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1093
Effective search space:   756356
Effective search space used:   756356
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)