Query= MSMg01no326_b09.b1 MSMg01no326_b09.b1 CHROMAT_FILE:
MSMg01no326_b09.b1 PHD_FILE: MSMg01no326_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:43 2005
(359 letters)
>mm_chr3_51593682_51594442
Length = 761
Score = 634 bits (328), Expect = 0.0
Identities = 350/358 (97%), Gaps = 2/358 (0%)
Strand = Plus / Plus
Query: 4 gaattccattctcttcctcctgtctttctttcttctcaccccattctc--agccttcaaa 61
||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 204 gaattccattcacttactcctgtctttctttcttctcaccccgttctctcagccttcaaa 263
Query: 62 ttatagggctaaagttctttccaaataattctctccgtgcccactcccctccaccagctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatagggctaaagttctttccaaataattctctccgtgcccactcccctccaccagctg 323
Query: 122 tgtggtcagatggaggtttccaaaaatgcaactacaactgcactagaacagcctgcctgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtggtcagatggaggtttccaaaaatgcaactacaactgcactagaacagcctgcctgt 383
Query: 182 cagtctccagcggcctctcttcactgttagcacagcgggtagaatcctggaaatgacatg 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 384 cagtcttcagcggcctctcttcactgttagcacagcgggtagaatcctggaaatgacgtg 443
Query: 242 accccagactatttcccagcttcaccccacctcacttttccctgcccatgagctgtgtcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accccagactatttcccagcttcaccccacctcacttttccctgcccatgagctgtgtcc 503
Query: 302 ctctaagccctaggacgtcacgacacgctttctcctagtcaccacgttctgtcttagc 359
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 ctctaagccctaggacgtcacgacacgctttttcctagtcaccacgttctgtcttagc 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 761
Length adjustment: 9
Effective length of query: 350
Effective length of database: 752
Effective search space: 263200
Effective search space used: 263200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_b09.g1 MSMg01no326_b09.g1 CHROMAT_FILE:
MSMg01no326_b09.g1 PHD_FILE: MSMg01no326_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:43 2005
(336 letters)
>mm_chr3_51759709_51760444
Length = 736
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 1 cataatagcttgactacagtagggaaagggcagcagaaaccatctgtagtgtttcatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cataatagcttgactacagtagggaaagggcagcagaaaccatctgtagtgtttcatctt 477
Query: 61 tcattgatggtgaggcagggaggacagtcagttccggtcctctcggctgtctctggactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcattgatggtgaggcagggaggacagtcagttccggtcctctcggctgtctctggactg 417
Query: 121 gtggtccaggtgccttatgatttcttgatttctcgtaaggaatagaacttgccccatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtggtccaggtgccttatgatttcttgatttctcgtaaggaatagaacttgccccatagc 357
Query: 181 tgaagttgccgatgctgttaagagcagtatttcagtggagggaagtgactttggaagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgaagttgccgatgctgttaagagcagtatttcagtggagggaagtgactttggaagttc 297
Query: 241 tgggatatttgtagtctcacccgtggttcctgcgtctgtgccatccagagctctggctgt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 296 tgggagatttgtagtctcacccgtggttcctgcgtctgtgccatccagagccctggctgt 237
Query: 301 ggattaagttctcggtttcacagagtttctcattgc 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggattaagttctcggtttcacagagtttctcattgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
