CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGAGCCGCGG
AATTCTTATGTCTGCTATTGTATTTTGAGATCTGTATGTCTAGAGACCAG
GAACAAAGAATAGCTTTTCTCTTCCAGGTCCCATAGATATATGACTTATT
TAAACCTAGTCAACAAAAAATTCAAGTATAAAGCTTTAATTAGACCACAA
ACAGGTAACATGTATTTTCAATTATAATAAAGGATGTCTTCAATTTTCTT
TGAAAATTAGTATCATATTTCACTATTTACAAATAATTATTGTAAAGCAA
CATACTTTCCTAAGCTGTGCAAATAATTATGCTTTCTATAATAGGCTTCC
AAATGATGCATACATTTAGCAATCATAGCTAAAATTTTATGATTATAAGT
GACAGATGTCTGTAGCCCGCAATCATTTTAACATGACATTTTCAATTATT
ATAGCTATATTGATGAAAGAAGATGAAGGCACTCTCAGATGCCAAAGCCC
ATTATTTCAACTTTATATACAGCTGTCAAGTCCTAATAATTCCAAAGGGA
GACAACGGTTCTGGAATAAAAATGCACAGGGCAGGTCCCCTGGCAATGTG
AAAGCAAGTGTGATCTTGCGAATATAAATGATAAAAAGATAAGTCCAGAT
CTGGATTTTCACTTTTAGTTCCCCTTGAAAATGATTTTCTTAAAGCTTAT
AGCTGAAGGAATATGTCAGACCAGGGTGCTCAGN

NGGGGGGAGGGGNGGGGGCGGNACCCCCAAACCCCCNCCGGNGNNNNCCC
AATGCAGTGGGNAGCCTGGNGGNCGCCGGTTCCCGACCCGNANGNGANNN
NNNGNGTAGCCACAGAAGAGGNGGNNNNGNNNNGAGNNNNNNNNNNANNG
GGNNNANNNGANNNCCCCGAGNCCACCNNCNNGAGNNCNNNANANNNANG
GGANANGGGNCACCNANCGGAANNAGGANAGGNAAAGAACCNNNCCCAAC
CGGGGGGGGGNCNNNNGGNCNGGNNGACAGGGNCNNNGGCCNNGTTTTTT
TTTTGCAACTTTATGAGGTCCCATTTATCAATTCTCGATCTTACAGCACA
AGCCANGGCTGTTTTTTTTTTTAACAAANCCCCNGNACCCANANCNNCAA
GGCNTTTTTTTACTCCCCCCTACATAAGTTTCAGTGTCTCTGGTTTTAGG
TGGAGTTCCTTGAACCACTTAAATTTGACCTTAGNACAAGGAGATAGGAA
TGGATGAATTCGCATTCCTCTACATGATAACCGCCAGTTGTGCCAGTACC
ATTTGTGGAAAATGTTGCCTTATTTCCACTGGATGGTTTTAGCTCCCTTG
TCAAAGATCAAGTGACCATATGTGTGTGGGTTCATCTCTGGGTCTGCAAT
TCGATTCCATTGGTCTACTTGTCGTGCGCTATACCAGGACCACGTTTTTT
TTTTTTTTTTTCGCNCCGGAAGAACAGCCTTAGGCCAAGGCATGGTGATT
TCCCACCCGAGGGTCTTTCTAGGCCTTGAA

Query= MSMg01no326_f19.b1 MSMg01no326_f19.b1 CHROMAT_FILE:
MSMg01no326_f19.b1 PHD_FILE: MSMg01no326_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:04 2005
         (654 letters)



>mm_chr3_114329867_114330920
          Length = 1054

 Score = 1216 bits (629), Expect = 0.0
 Identities = 644/649 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcttatgtctgctattgtattttgagatctgtatgtctagagaccaggaacaaaga 65
           ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gaattcttatgccagttattgtattttgagatctgtatgtctagagaccaggaacaaaga 795

                                                                       
Query: 66  atagcttttctcttccaggtcccatagatatatgacttatttaaacctagtcaacaaaaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 atagcttttctcttccaggtcccatagatatatgacttatttaaacctagtcaacaaaaa 735

                                                                       
Query: 126 attcaagtataaagctttaattagaccacaaacaggtaacatgtattttcaattataata 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 attcaagtataaagctttaattagaccacaaacaggtaacatgtattttcaattataata 675

                                                                       
Query: 186 aaggatgtcttcaattttctttgaaaattagtatcatatttcactatttacaaataatta 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaggatgtcttcaattttctttgaaaattagtatcatatttcactatttacaaataatta 615

                                                                       
Query: 246 ttgtaaagcaacatactttcctaagctgtgcaaataattatgctttctataataggcttc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttgtaaagcaacatactttcctaagctgtgcaaataattatgctttctataataggcttc 555

                                                                       
Query: 306 caaatgatgcatacatttagcaatcatagctaaaattttatgattataagtgacagatgt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caaatgatgcatacatttagcaatcatagctaaaattttatgattataagtgacagatgt 495

                                                                       
Query: 366 ctgtagcccgcaatcattttaacatgacattttcaattattatagctatattgatgaaag 425
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctgtagcttgcaatcattttaacatgacattttcaattattatagctatattgatgaaag 435

                                                                       
Query: 426 aagatgaaggcactctcagatgccaaagcccattatttcaactttatatacagctgtcaa 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagatgaaggcactctcagatgccaaagcccattatttcaactttatatacagctgtcaa 375

                                                                       
Query: 486 gtcctaataattccaaagggagacaacggttctggaataaaaatgcacagggcaggtccc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtcctaataattccaaagggagacaacggttctggaataaaaatgcacagggcaggtccc 315

                                                                       
Query: 546 ctggcaatgtgaaagcaagtgtgatcttgcgaatataaatgataaaaagataagtccaga 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctggcaatgtgaaagcaagtgtgatcttgcgaatataaatgataaaaagataagtccaga 255

                                                            
Query: 606 tctggattttcacttttagttccccttgaaaatgattttcttaaagctt 654
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tctggattttcacttttagttccccttgaaaatgattttcttaaagctt 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)