TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTCCAAACTTGATGAAAAAAAAAAAAAAGGTCATATTGATATGCT
AATCCAGGACTTCTGTAATTCCACTAGCTATAGGAAGGGTCAAAAAATAA
GAATGGAAATGACCTTTCAAATTCCGTTCTAAAAGATAGAAGGAACAAAG
CTCTCACATCCTAAGAATGTTAGAACATTCTGTCTATAAAGCGAAAAACT
TAGATTTGGATAAAATGTGCATAAACTAAGACATGTAAGTCCTCCATCAT
TCTCCCTAATCATTGTCCCTTTACTCCCTTCTAACTCATATTTCTAACTT
ATATTCTTTCTCCTCTTTTCTTCCTTCCTCTTCTTCTTACCCCAGATCTT
ATTCTTGGTTTCCATTTCCCTCACCAATTTTTTTCTTTTTTTTCTTTCTT
TCTTCTTTCCTTCCTTTCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTTCCTTTTCCTTC
CTTCCATCTTTCCTTCCTTCCTTCTTTGCTTCTTTCCTTCCTTCCTTCTT
TGCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCTTCTTTTTTTTTTTCCGGATAGGGGTCAGGGTCT
GAGCTATATGGTGCAGGCTGGCATTGATTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATAAGGAATNNAACAACCAATAT
TCCAAACCCCAATTTCAGGAACTTTCCCCCCCAACCCCCTGGGAAGCTTT
CCCCCAGGGGGACCTTAAAACCCCCCCCCCAAAAAAAATAAAAAAAGGGG
GAAAAAAACCTTTTGGGGTTTCCCCGCCCCCTTTTATGGTTACCCAAAAA
AAAAGGGGCCCTTTTTCCCCGGGGGCAAAAACAGGGGGGGGAAAAAAAAA
AAAAAGCCCTCTCTTTTTGGGGGCCCCCCCCGGGGGGGGGAGAGAGAGGT
TTCTCTTTCATTGGGGGCCCCCCCCTTTATTTTTTGAGAGGGGGGTAATA
TTTTTTTTTTTTCTTTCCCCCCCCCCTTTTATATATTTACTTACACAATA
AAAAAATTTNCCGTAGCTTCCCTTTTTTCTGCTGTTGCGGCGCCGCTGTT
AACCATATATTATATNTCCCCAAAAATAATATCCCCTTCCTTCTTTTTTT
TCCTTATATAAAAAAATATCATTTTTTCCATTCTCTGCCGTACCTATTAA
AAAAAATTTTTAGGCTGTGGGGCTGGCCCTTTCCCCCCCTATACCCAAAA
AAATATAACATTTTTTTTTTTTTTTTGCGGTGGCGGG

Query= MSMg01no326_l05.b1 MSMg01no326_l05.b1 CHROMAT_FILE:
MSMg01no326_l05.b1 PHD_FILE: MSMg01no326_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:27 2005
         (635 letters)



>mm_chr3_45294486_45295518
          Length = 1033

 Score = 1042 bits (539), Expect = 0.0
 Identities = 602/635 (94%), Gaps = 24/635 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctccaaacttgatgaaaaaaaaaaaaaaggtcatattgatatgctaatccagg 64
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 205 gaattctctccaaacttgatgaaaaaaaaaaaa--ggtcatattgatatgctaatccagg 262

                                                                       
Query: 65  acttctgtaattccactagctataggaagggtcaaaaaataagaatggaaatgacctttc 124
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acttctgtaattccattagctataggaagggtcaaaaaataagaatggaaatgacctttc 322

                                                                       
Query: 125 aaattccgttctaaaagatagaaggaacaaagctctcacatcctaagaatgttagaacat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaattccgttctaaaagatagaaggaacaaagctctcacatcctaagaatgttagaacat 382

                                                                       
Query: 185 tctgtctataaagcgaaaaacttagatttggataaaatgtgcataaactaagacatgtaa 244
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctgtctataaagcgaaaagcttagatttggataaaatgtgcataaactaagacatgtaa 442

                                                                       
Query: 245 gtcctccatca-ttctccctaatcattgtccctttactcccttctaactcatatttctaa 303
           |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 443 gtcctcca-caattctccctaatcatcgtccctttactcccttctaactcatatttctaa 501

                                                                       
Query: 304 cttatattctttctcctcttttcttccttcctcttcttcttaccccagatcttattcttg 363
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 502 cttatattctttctcctcttttcttccttcctcttcttcttaccccagatctcattcttg 561

                                                                       
Query: 364 gtttccatttccctcaccaatttttttcttttttttctttctttcttctttccttccttt 423
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 562 gtttccatttccctcaccaatttttttctttcttttctttctttcttctttccttccttc 621

                                                                       
Query: 424 cttctttccttccttccttccttccttccttccttcct---tccttccttccttccttcc 480
           |||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 622 cttccttccttccttccttccttccttccttccttcctccttccttccttccttccttcc 681

                                                                       
Query: 481 ttccttccttcttttccttttccttccttccatctttccttccttccttctttgcttctt 540
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 682 ttccttccttcttttccttttccttccttccatctttccttccttccttccttgcttctt 741

                                                                       
Query: 541 tccttccttccttctttgcttctttccttccttccttccttccttccttccttccttcct 600
           ||||||||||||||            ||||||||||||||||||||||||||||||||||
Sbjct: 742 tccttccttccttc------------cttccttccttccttccttccttccttccttcct 789

                                              
Query: 601 tccttccttccttccttccttcttctttttttttt 635
           |||||||||||||      ||||||||||||||||
Sbjct: 790 tccttccttcctta-----ttcttctttttttttt 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 247
Number of extensions: 79
Number of successful extensions: 79
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1033
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1023
Effective search space:   639375
Effective search space used:   639375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)