Query= MSMg01no329_a14.b1 MSMg01no329_a14.b1 CHROMAT_FILE:
MSMg01no329_a14.b1 PHD_FILE: MSMg01no329_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:21 2005
(392 letters)
>mm_chr3_146949971_146950762
Length = 792
Score = 611 bits (316), Expect = e-179
Identities = 366/384 (95%), Gaps = 4/384 (1%)
Strand = Plus / Plus
Query: 7 ggaattcactct--tgcctcatggaggagcaaagtctctgggcacagcatcttcctggtt 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcactcaggtg--tcatggaggagcaaagtctctgggcacagcatcttcctggtt 264
Query: 65 cagagaggacaaatcaccgggtccttctgtttatgacctccaataccgccgttttctgtt 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 cagagaggacaaatcaccgggtccttctgtttatgacctccaatactgccgttttctgtt 324
Query: 125 ttcccgagctgggtgatctacatgaaatggatgatttgatggagaaatggttattttcac 184
||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ttcccgagctgggcgatctacgtgaaaaggatgatttgatggagaaatggttattttcac 384
Query: 185 aagcccaggaggacctgtcccttagacgtgctttgtaattatactttctgcagcttgcta 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 aagcccaggaggacctgtcccttagacgtgctttgtaattgtactttctgcagcttgcta 444
Query: 245 ggaggaaagtgactacatcattaggtggtcatgcttagaaggccgtcaaaagccacatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaggaaagtgactacatcattaggtggtcatgcttagaaggccgtcaaaagccacatct 504
Query: 305 acacaacccaagcaggcaactctaaacaaaaagtgttgaaagatgtgcatggctgagtcg 364
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||| |
Sbjct: 505 acacaacccaagcagacgacgctaaacaaaaagtgttgaaagatgtgcatggctgagtgg 564
Query: 365 ctcacccacaaatgcctttctctg 388
| ||| | |||||||||||||||
Sbjct: 565 cacacttagaaatgcctttctctg 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_a14.g1 MSMg01no329_a14.g1 CHROMAT_FILE:
MSMg01no329_a14.g1 PHD_FILE: MSMg01no329_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:21 2005
(558 letters)
>mm_chr3_147120178_147121135
Length = 958
Score = 1017 bits (526), Expect = 0.0
Identities = 550/558 (98%)
Strand = Plus / Minus
Query: 1 cacatggacaggtaatctatttcataattcacagggctgtggtgaagaccagcggagatg 60
||||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||||
Sbjct: 758 cacatggacaggtaaactatctcataattcatagggctgtggcgaagaccagcggagatg 699
Query: 61 ggtcctcagggcttgtggctgcacttgaccggtgtggaaactgaggacgcagtgagttca 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 698 ggtcctcagggcttgtggctgcacttgactggtgtggaaactgaggacgcagtgagttca 639
Query: 121 agactaaccaaccttctttatgtgaatgacagaaagtgtcaggggattaaataaccctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agactaaccaaccttctttatgtgaatgacagaaagtgtcaggggattaaataaccctta 579
Query: 181 cacacatgagctgcacactacatcatagtgctgctcacttgatcccgactcctgacacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cacacatgagctgcacactacatcatagtgctgctcacttgatcccgactcctgacacac 519
Query: 241 tttcatttcccagttaggggcttaagaagaaatcaaagtgacagcaaattctgcatgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tttcatttcccagttaggggcttaagaagaaatcaaagtgacagcaaattctgcatgatt 459
Query: 301 tagatagagacatttcattcctgaaacatatattgatgataagattgttgagaaaggcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tagatagagacatttcattcctgaaacatatattgatgataagattgttgagaaaggcag 399
Query: 361 tagaaaggaggacgaggggaccactatgagttatggattgaagttctcagaggacacaat 420
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcgaaaggaggacaaggggaccactatgagttatggattgaagttctcagaggacacaat 339
Query: 421 acccatgaattgtttacattgtatatctatgaattaatgccaggctactaaataagcaac 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 338 acccatgaattgtttacattgtatatctatgaattaatgccaggctacaaaataagcaac 279
Query: 481 agaaaaccaagaggagtgaaagctgaacaagatgatctttcaaacaattacgtacgtatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agaaaaccaagaggagtgaaagctgaacaagatgatctttcaaacaattacgtacgtatg 219
Query: 541 taaggagctggagtcaga 558
||||||||||||||||||
Sbjct: 218 taaggagctggagtcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
