Query= MSMg01no329_m06.b1 MSMg01no329_m06.b1 CHROMAT_FILE:
MSMg01no329_m06.b1 PHD_FILE: MSMg01no329_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:20 2005
(319 letters)
>mm_chr3_119456133_119456851
Length = 719
Score = 551 bits (285), Expect = e-161
Identities = 310/319 (97%), Gaps = 2/319 (0%)
Strand = Plus / Plus
Query: 1 agtgatacagcaggctcccctcagccaaaagagatatatcccaaagcccccactcacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agtgatacagcaggctcccctcagccaaaagagatatatcccaaagcccccactcacatg 262
Query: 61 gataaacagctagaatcaagctctattgaagatttttttctatatgttacatgcatatgg 120
||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 263 gataaacagctagaatcaaactctatagaagattttt--ctatatgttacatgcatatgg 320
Query: 121 taaggcttaaacaggacacaggaccttactaagaataaataataaaacaaaacaacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggcttaaacaggacacaggaccttactaagaataaataataaaacaaaacaacacaa 380
Query: 181 tgaagtagaagtatatacttttggatcattacattagaccagtagtgttcatttcaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaagtagaagtatatacttttggatcattacattagaccagtagtgttcatttcaataa 440
Query: 241 ataaatatgccttcattataaagttccatcaaaaagaaaaacactgtgcaattatggatg 300
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ataaatatgccttcattacaaagttccatcaaaaagaaaaacactgtgtaattatggatg 500
Query: 301 cctacacatcatttcatac 319
|||| | || |||||||||
Sbjct: 501 cctatagattatttcatac 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_m06.g1 MSMg01no329_m06.g1 CHROMAT_FILE:
MSMg01no329_m06.g1 PHD_FILE: MSMg01no329_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:20 2005
(404 letters)
>mm_chr3_119646923_119647726
Length = 804
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%)
Strand = Plus / Minus
Query: 5 tcttggacttacttgctggcatctttggactcctttctccggctttatccttagtacgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tcttggacttacttgctggcatctttggactcctttctccggctttatccttagtacgcc 545
Query: 65 agacttttctatcattttcagcagcgctgagaataaggcagataatctgctgcaatgttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agacttttctatcattttcagcagcgctgagaataaggcagataatctgctgcaatgttg 485
Query: 125 acttgtggcttgtgattgtgactgtgccgtagaaagcttgatagattgaggagactttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acttgtggcttgtgattgtgactgtgccgtagaaagcttgatagattgaggagactttca 425
Query: 185 tatctcccctacacagggagagcagacagcctcaaacaactaaaatctctttcctacctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatctcccctacacagggagagcagacagcctcaaacaactaaaatctctttcctacctg 365
Query: 245 cttgcaatgaataacttccatctgtgggaggagccccctggagggctgctgttatgcaaa 304
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 364 cttgcaatgaataacttccgtctgtgggaggagccccctggagggttgctgttatgcaaa 305
Query: 305 atgttgtcccatcaagagaaaggacttgagatagagcccacagctgtcttgttgacagat 364
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 304 atgttgtcccatcaagagaaaggacttgagatagagccgagagctgtcttgttgacagat 245
Query: 365 gattagcatgtctttgtcatttttttttcctactctacag 404
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gattagcatgtctttgtcatttttttttcctactctacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
